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Q9Y3D5

- RT18C_HUMAN

UniProt

Q9Y3D5 - RT18C_HUMAN

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Protein

28S ribosomal protein S18c, mitochondrial

Gene

MRPS18C

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: UniProtKB

GO - Biological processi

  1. translation Source: UniProtKB
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiREACT_267602. Mitochondrial translation termination.
REACT_267677. Mitochondrial translation elongation.
REACT_267680. Mitochondrial translation initiation.

Names & Taxonomyi

Protein namesi
Recommended name:
28S ribosomal protein S18c, mitochondrial
Short name:
MRP-S18-c
Short name:
Mrps18-c
Short name:
S18mt-c
Alternative name(s):
28S ribosomal protein S18-1, mitochondrial
Short name:
MRP-S18-1
Gene namesi
Name:MRPS18C
ORF Names:CGI-134
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 4

Organism-specific databases

HGNCiHGNC:16633. MRPS18C.

Subcellular locationi

Mitochondrion 1 Publication

GO - Cellular componenti

  1. mitochondrial small ribosomal subunit Source: UniProtKB
Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA31005.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini? – 14228S ribosomal protein S18c, mitochondrialPRO_0000030629
Transit peptidei1 – ?MitochondrionSequence Analysis

Proteomic databases

MaxQBiQ9Y3D5.
PaxDbiQ9Y3D5.
PeptideAtlasiQ9Y3D5.
PRIDEiQ9Y3D5.

PTM databases

PhosphoSiteiQ9Y3D5.

Expressioni

Gene expression databases

BgeeiQ9Y3D5.
CleanExiHS_MRPS18C.
ExpressionAtlasiQ9Y3D5. baseline and differential.
GenevestigatoriQ9Y3D5.

Organism-specific databases

HPAiHPA050404.

Interactioni

Subunit structurei

Component of the mitochondrial ribosome small subunit (28S) which comprises a 12S rRNA and about 30 distinct proteins.

Protein-protein interaction databases

BioGridi119229. 12 interactions.
STRINGi9606.ENSP00000295491.

Structurei

3D structure databases

ProteinModelPortaliQ9Y3D5.
SMRiQ9Y3D5. Positions 73-125.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S18P family.By similarity

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiNOG242052.
GeneTreeiENSGT00390000003791.
HOGENOMiHOG000218466.
HOVERGENiHBG068938.
InParanoidiQ9Y3D5.
KOiK02963.
OMAiQVTSNED.
OrthoDBiEOG7JDR1D.
PhylomeDBiQ9Y3D5.
TreeFamiTF315059.

Family and domain databases

Gene3Di4.10.640.10. 1 hit.
InterProiIPR001648. Ribosomal_S18.
IPR018275. Ribosomal_S18_CS.
[Graphical view]
PANTHERiPTHR13479. PTHR13479. 1 hit.
PfamiPF01084. Ribosomal_S18. 1 hit.
[Graphical view]
ProDomiPD002239. Ribosomal_S18. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF46911. SSF46911. 1 hit.
TIGRFAMsiTIGR00165. S18. 1 hit.
PROSITEiPS00057. RIBOSOMAL_S18. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9Y3D5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAAVVAVCGG LGRKKLTHLV TAAVSLTHPG THTVLWRRGC SQQVSSNEDL
60 70 80 90 100
PISMENPYKE PLKKCILCGK HVDYKNVQLL SQFVSPFTGC IYGRHITGLC
110 120 130 140
GKKQKEITKA IKRAQIMGFM PVTYKDPAYL KDPKVCNIRY RE
Length:142
Mass (Da):15,850
Last modified:November 1, 1999 - v1
Checksum:i375E0F8558492E63
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF151892 mRNA. Translation: AAD34129.1.
BC005186 mRNA. Translation: AAH05186.1.
CCDSiCCDS3604.1.
RefSeqiNP_001284698.1. NM_001297769.1.
NP_001284699.1. NM_001297770.1.
NP_057151.1. NM_016067.3.
UniGeneiHs.334772.
Hs.436161.

Genome annotation databases

EnsembliENST00000295491; ENSP00000295491; ENSG00000163319.
GeneIDi51023.
KEGGihsa:51023.
UCSCiuc003hor.4. human.

Polymorphism databases

DMDMi24212202.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF151892 mRNA. Translation: AAD34129.1 .
BC005186 mRNA. Translation: AAH05186.1 .
CCDSi CCDS3604.1.
RefSeqi NP_001284698.1. NM_001297769.1.
NP_001284699.1. NM_001297770.1.
NP_057151.1. NM_016067.3.
UniGenei Hs.334772.
Hs.436161.

3D structure databases

ProteinModelPortali Q9Y3D5.
SMRi Q9Y3D5. Positions 73-125.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 119229. 12 interactions.
STRINGi 9606.ENSP00000295491.

PTM databases

PhosphoSitei Q9Y3D5.

Polymorphism databases

DMDMi 24212202.

Proteomic databases

MaxQBi Q9Y3D5.
PaxDbi Q9Y3D5.
PeptideAtlasi Q9Y3D5.
PRIDEi Q9Y3D5.

Protocols and materials databases

DNASUi 51023.
Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000295491 ; ENSP00000295491 ; ENSG00000163319 .
GeneIDi 51023.
KEGGi hsa:51023.
UCSCi uc003hor.4. human.

Organism-specific databases

CTDi 51023.
GeneCardsi GC04P084301.
H-InvDB HIX0034634.
HGNCi HGNC:16633. MRPS18C.
HPAi HPA050404.
MIMi 611983. gene.
neXtProti NX_Q9Y3D5.
PharmGKBi PA31005.
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG242052.
GeneTreei ENSGT00390000003791.
HOGENOMi HOG000218466.
HOVERGENi HBG068938.
InParanoidi Q9Y3D5.
KOi K02963.
OMAi QVTSNED.
OrthoDBi EOG7JDR1D.
PhylomeDBi Q9Y3D5.
TreeFami TF315059.

Enzyme and pathway databases

Reactomei REACT_267602. Mitochondrial translation termination.
REACT_267677. Mitochondrial translation elongation.
REACT_267680. Mitochondrial translation initiation.

Miscellaneous databases

ChiTaRSi MRPS18C. human.
GenomeRNAii 51023.
NextBioi 53554.
PROi Q9Y3D5.
SOURCEi Search...

Gene expression databases

Bgeei Q9Y3D5.
CleanExi HS_MRPS18C.
ExpressionAtlasi Q9Y3D5. baseline and differential.
Genevestigatori Q9Y3D5.

Family and domain databases

Gene3Di 4.10.640.10. 1 hit.
InterProi IPR001648. Ribosomal_S18.
IPR018275. Ribosomal_S18_CS.
[Graphical view ]
PANTHERi PTHR13479. PTHR13479. 1 hit.
Pfami PF01084. Ribosomal_S18. 1 hit.
[Graphical view ]
ProDomi PD002239. Ribosomal_S18. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
SUPFAMi SSF46911. SSF46911. 1 hit.
TIGRFAMsi TIGR00165. S18. 1 hit.
PROSITEi PS00057. RIBOSOMAL_S18. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Identification of novel human genes evolutionarily conserved in Caenorhabditis elegans by comparative proteomics."
    Lai C.-H., Chou C.-Y., Ch'ang L.-Y., Liu C.-S., Lin W.-C.
    Genome Res. 10:703-713(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Brain.
  3. "The small subunit of the mammalian mitochondrial ribosome: identification of the full complement of ribosomal proteins present."
    Koc E.C., Burkhart W., Blackburn K., Moseley A., Spremulli L.L.
    J. Biol. Chem. 276:19363-19374(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION.
  4. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiRT18C_HUMAN
AccessioniPrimary (citable) accession number: Q9Y3D5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 19, 2002
Last sequence update: November 1, 1999
Last modified: November 26, 2014
This is version 116 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 4
    Human chromosome 4: entries, gene names and cross-references to MIM
  2. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  3. Ribosomal proteins
    Ribosomal proteins families and list of entries
  4. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3