Q9Y232 (CDYL1_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Chromodomain Y-like protein
Short name=CDY-like
EC=2.3.1.48

Gene names

Name:	CDYL
Synonyms:	CDYL1

Organism

Homo sapiens (Human) [Reference proteome]

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

Protein attributes

Sequence length	598 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Function	Acts as repressor of transcription By similarity. Has histone acetyltransferase activity, with a preference for histone H4. Ref.6
Catalytic activity	Acetyl-CoA + [histone] = CoA + acetyl-[histone].
Subunit structure	Interacts with HDAC1 and HDAC2 via its C-terminal acetyl-CoA-binding domain By similarity.
Subcellular location	Nucleus By similarity.
Tissue specificity	Ubiquitous. Expressed at moderate levels in all tissues examined.
Miscellaneous	Interaction with HDAC1 or HDAC2 prevents Coenzyme A binding By similarity.
Sequence similarities	Contains 1 chromo domain.
Sequence caution	The sequence CAB43304.1 differs from that shown. Reason:

Ontologies

Keywords
Biological process	Transcription Transcription regulation
Cellular component	Nucleus
Coding sequence diversity	Alternative splicing Polymorphism
Molecular function	Acyltransferase Transferase
PTM	Methylation Phosphoprotein
Technical term	3D-structure Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	histone acetylation Inferred from electronic annotation. Source: GOC regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW spermatogenesis Traceable author statement Ref.1. Source: ProtInc transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	nucleus Inferred from direct assay PubMed 18450745. Source: MGI
Molecular_function	histone acetyltransferase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Alternative products

This entry describes 4 isoforms produced by alternative splicing. [Align] [Select]

Isoform 1 (identifier: Q9Y232-1)

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

Isoform 2 (identifier: Q9Y232-2)

The sequence of this isoform differs from the canonical sequence as follows:
     1-54: Missing.
     55-62: AQQPPALQ → MASEELYE

Isoform 3 (identifier: Q9Y232-3)

The sequence of this isoform differs from the canonical sequence as follows:
     1-289: Missing.

Isoform 4 (identifier: Q9Y232-4)

The sequence of this isoform differs from the canonical sequence as follows:
     1-186: Missing.

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

1 – 598

598

Chromodomain Y-like protein

PRO_0000080221

Regions

Domain

61 – 121

61

Chromo

Amino acid modifications

Modified residue

88

1

Phosphoserine Ref.10

Modified residue

135

1

N6,N6,N6-trimethyllysine; by EHMT2; alternate Ref.9

Modified residue

135

1

N6,N6-dimethyllysine; by EHMT2; alternate Ref.9

Modified residue

135

1

N6-methyllysine; by EHMT2; alternate Ref.9

Modified residue

201

1

Phosphoserine Ref.11

Modified residue

216

1

Phosphoserine Ref.10 Ref.11 Ref.12

Natural variations

Alternative sequence

1 – 289

289

Missing in isoform 3.

VSP_026382

Alternative sequence

1 – 186

186

Missing in isoform 4.

VSP_041025

Alternative sequence

1 – 54

54

Missing in isoform 2.

VSP_026383

Alternative sequence

55 – 62

8

AQQPPALQ → MASEELYE in isoform 2.

VSP_026384

Natural variant

2

1

T → A. Ref.1
Corresponds to variant rs3812179 [ dbSNP | Ensembl ].

VAR_032936

Natural variant

9

1

S → P. Ref.1
Corresponds to variant rs3812178 [ dbSNP | Ensembl ].

VAR_032937

Natural variant

48

1

V → A. Ref.1
Corresponds to variant rs13196069 [ dbSNP | Ensembl ].

VAR_032938

Natural variant

60

1

A → G. Ref.1
Corresponds to variant rs28360500 [ dbSNP | Ensembl ].

VAR_032939

Experimental info

Sequence conflict

205

1

S → N in BAF84290. Ref.2

Sequence conflict

291

1

D → N in BAG59526. Ref.2

Sequence conflict

443

1

V → L in BAF84290. Ref.2

Sequence conflict

558

1

N → S in BAG59526. Ref.2

Sequence conflict

584

1

M → T in AAI19683. Ref.4

Sequence conflict

591

1

L → M in AAI19683. Ref.4

Secondary structure

1

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598

Helix Strand Turn

Details...

Beta strand

66 – 71

6

Beta strand

77 – 81

5

Helix

88 – 90

3

Beta strand

92 – 95

4

Turn

96 – 98

3

Helix

103 – 113

11

Beta strand

342 – 349

8

Beta strand

352 – 357

6

Beta strand

360 – 363

4

Helix

369 – 384

16

Beta strand

390 – 397

8

Helix

405 – 414

10

Helix

416 – 436

21

Beta strand

441 – 445

5

Helix

452 – 455

4

Helix

457 – 459

3

Beta strand

460 – 466

7

Beta strand

470 – 472

3

Turn

475 – 479

5

Helix

486 – 494

9

Helix

496 – 505

10

Helix

511 – 516

6

Beta strand

521 – 524

4

Helix

526 – 528

3

Helix

529 – 541

13

Helix

545 – 556

12

Turn

557 – 559

3

Helix

560 – 579

20

Turn

581 – 584

4

Helix

585 – 596

12

Sequences

	Sequence		Length	Mass (Da)
	Isoform 1 [UniParc]. Last modified June 26, 2007. Version 2. Checksum: A34E7221130626EC	FASTA	598	66,482
	10 20 30 40 50 60 MTFQASHRSA WGKSRKKNWQ YEGPTQKLFL KRNNVSAPDG PSDPSISVSS EQSGAQQPPA 70 80 90 100 110 120 LQVERIVDKR KNKKGKTEYL VRWKGYDSED DTWEPEQHLV NCEEYIHDFN RRHTEKQKES 130 140 150 160 170 180 TLTRTNRTSP NNARKQISRS TNSNFSKTSP KALVIGKDHE SKNSQLFAAS QKFRKNTAPS 190 200 210 220 230 240 LSSRKNMDLA KSGIKILVPK SPVKSRTAVD GFQSESPEKL DPVEQGQEDT VAPEVAAEKP 250 260 270 280 290 300 VGALLGPGAE RARMGSRPRI HPLVPQVPGP VTAAMATGLA VNGKGTSPFM DALTANGTTN 310 320 330 340 350 360 IQTSVTGVTA SKRKFIDDRR DQPFDKRLRF SVRQTESAYR YRDIVVRKQD GFTHILLSTK 370 380 390 400 410 420 SSENNSLNPE VMREVQSALS TAAADDSKLV LLSAVGSVFC CGLDFIYFIR RLTDDRKRES 430 440 450 460 470 480 TKMAEAIRNF VNTFIQFKKP IIVAVNGPAI GLGASILPLC DVVWANEKAW FQTPYTTFGQ 490 500 510 520 530 540 SPDGCSTVMF PKIMGGASAN EMLLSGRKLT AQEACGKGLV SQVFWPGTFT QEVMVRIKEL 550 560 570 580 590 ASCNPVVLEE SKALVRCNMK MELEQANERE CEVLKKIWGS AQGMDSMLKY LQRKIDEF
	Isoform 2 [UniParc]. Checksum: D30E1CE197B67FC7	FASTA	544	60,609
	10 20 30 40 50 60 MASEELYEVE RIVDKRKNKK GKTEYLVRWK GYDSEDDTWE PEQHLVNCEE YIHDFNRRHT 70 80 90 100 110 120 EKQKESTLTR TNRTSPNNAR KQISRSTNSN FSKTSPKALV IGKDHESKNS QLFAASQKFR 130 140 150 160 170 180 KNTAPSLSSR KNMDLAKSGI KILVPKSPVK SRTAVDGFQS ESPEKLDPVE QGQEDTVAPE 190 200 210 220 230 240 VAAEKPVGAL LGPGAERARM GSRPRIHPLV PQVPGPVTAA MATGLAVNGK GTSPFMDALT 250 260 270 280 290 300 ANGTTNIQTS VTGVTASKRK FIDDRRDQPF DKRLRFSVRQ TESAYRYRDI VVRKQDGFTH 310 320 330 340 350 360 ILLSTKSSEN NSLNPEVMRE VQSALSTAAA DDSKLVLLSA VGSVFCCGLD FIYFIRRLTD 370 380 390 400 410 420 DRKRESTKMA EAIRNFVNTF IQFKKPIIVA VNGPAIGLGA SILPLCDVVW ANEKAWFQTP 430 440 450 460 470 480 YTTFGQSPDG CSTVMFPKIM GGASANEMLL SGRKLTAQEA CGKGLVSQVF WPGTFTQEVM 490 500 510 520 530 540 VRIKELASCN PVVLEESKAL VRCNMKMELE QANERECEVL KKIWGSAQGM DSMLKYLQRK IDEF
	Isoform 3 [UniParc]. Checksum: 6033C3171A80CB47	FASTA	309	34,561
	10 20 30 40 50 60 MDALTANGTT NIQTSVTGVT ASKRKFIDDR RDQPFDKRLR FSVRQTESAY RYRDIVVRKQ 70 80 90 100 110 120 DGFTHILLST KSSENNSLNP EVMREVQSAL STAAADDSKL VLLSAVGSVF CCGLDFIYFI 130 140 150 160 170 180 RRLTDDRKRE STKMAEAIRN FVNTFIQFKK PIIVAVNGPA IGLGASILPL CDVVWANEKA 190 200 210 220 230 240 WFQTPYTTFG QSPDGCSTVM FPKIMGGASA NEMLLSGRKL TAQEACGKGL VSQVFWPGTF 250 260 270 280 290 300 TQEVMVRIKE LASCNPVVLE ESKALVRCNM KMELEQANER ECEVLKKIWG SAQGMDSMLK YLQRKIDEF
	Isoform 4 [UniParc]. Checksum: 6AFC72E69A0462A3	FASTA	412	45,135
	10 20 30 40 50 60 MDLAKSGIKI LVPKSPVKSR TAVDGFQSES PEKLDPVEQG QEDTVAPEVA AEKPVGALLG 70 80 90 100 110 120 PGAERARMGS RPRIHPLVPQ VPGPVTAAMA TGLAVNGKGT SPFMDALTAN GTTNIQTSVT 130 140 150 160 170 180 GVTASKRKFI DDRRDQPFDK RLRFSVRQTE SAYRYRDIVV RKQDGFTHIL LSTKSSENNS 190 200 210 220 230 240 LNPEVMREVQ SALSTAAADD SKLVLLSAVG SVFCCGLDFI YFIRRLTDDR KRESTKMAEA 250 260 270 280 290 300 IRNFVNTFIQ FKKPIIVAVN GPAIGLGASI LPLCDVVWAN EKAWFQTPYT TFGQSPDGCS 310 320 330 340 350 360 TVMFPKIMGG ASANEMLLSG RKLTAQEACG KGLVSQVFWP GTFTQEVMVR IKELASCNPV 370 380 390 400 410 VLEESKALVR CNMKMELEQA NERECEVLKK IWGSAQGMDS MLKYLQRKID EF

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Retroposition of autosomal mRNA yielded testis-specific gene family on human Y chromosome." Lahn B.T., Page D.C. Nat. Genet. 21:429-433(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), VARIANTS ALA-2; PRO-9; ALA-48 AND GLY-60. Tissue: Testis.
[2]	"Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S. Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 2 AND 4). Tissue: Placenta and Tongue.
[3]	"The DNA sequence and analysis of human chromosome 6." Mungall A.J., Palmer S.A., Sims S.K., Edwards C.A., Ashurst J.L., Wilming L., Jones M.C., Horton R., Hunt S.E., Scott C.E., Gilbert J.G.R., Clamp M.E., Bethel G., Milne S., Ainscough R., Almeida J.P., Ambrose K.D., Andrews T.D. , Ashwell R.I.S., Babbage A.K., Bagguley C.L., Bailey J., Banerjee R., Barker D.J., Barlow K.F., Bates K., Beare D.M., Beasley H., Beasley O., Bird C.P., Blakey S.E., Bray-Allen S., Brook J., Brown A.J., Brown J.Y., Burford D.C., Burrill W., Burton J., Carder C., Carter N.P., Chapman J.C., Clark S.Y., Clark G., Clee C.M., Clegg S., Cobley V., Collier R.E., Collins J.E., Colman L.K., Corby N.R., Coville G.J., Culley K.M., Dhami P., Davies J., Dunn M., Earthrowl M.E., Ellington A.E., Evans K.A., Faulkner L., Francis M.D., Frankish A., Frankland J., French L., Garner P., Garnett J., Ghori M.J., Gilby L.M., Gillson C.J., Glithero R.J., Grafham D.V., Grant M., Gribble S., Griffiths C., Griffiths M.N.D., Hall R., Halls K.S., Hammond S., Harley J.L., Hart E.A., Heath P.D., Heathcott R., Holmes S.J., Howden P.J., Howe K.L., Howell G.R., Huckle E., Humphray S.J., Humphries M.D., Hunt A.R., Johnson C.M., Joy A.A., Kay M., Keenan S.J., Kimberley A.M., King A., Laird G.K., Langford C., Lawlor S., Leongamornlert D.A., Leversha M., Lloyd C.R., Lloyd D.M., Loveland J.E., Lovell J., Martin S., Mashreghi-Mohammadi M., Maslen G.L., Matthews L., McCann O.T., McLaren S.J., McLay K., McMurray A., Moore M.J.F., Mullikin J.C., Niblett D., Nickerson T., Novik K.L., Oliver K., Overton-Larty E.K., Parker A., Patel R., Pearce A.V., Peck A.I., Phillimore B.J.C.T., Phillips S., Plumb R.W., Porter K.M., Ramsey Y., Ranby S.A., Rice C.M., Ross M.T., Searle S.M., Sehra H.K., Sheridan E., Skuce C.D., Smith S., Smith M., Spraggon L., Squares S.L., Steward C.A., Sycamore N., Tamlyn-Hall G., Tester J., Theaker A.J., Thomas D.W., Thorpe A., Tracey A., Tromans A., Tubby B., Wall M., Wallis J.M., West A.P., White S.S., Whitehead S.L., Whittaker H., Wild A., Willey D.J., Wilmer T.E., Wood J.M., Wray P.W., Wyatt J.C., Young L., Younger R.M., Bentley D.R., Coulson A., Durbin R.M., Hubbard T., Sulston J.E., Dunham I., Rogers J., Beck S. Nature 425:805-811(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[4]	"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 2 AND 3), NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 253-598 (ISOFORM 1). Tissue: Eye and Uterus.
[5]	"The full-ORF clone resource of the German cDNA consortium." Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U., Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H., Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K., Ottenwaelder B., Poustka A., Wiemann S., Schupp I. BMC Genomics 8:399-399(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 337-598. Tissue: Uterus.
[6]	"Previously uncharacterized histone acetyltransferases implicated in mammalian spermatogenesis." Lahn B.T., Tang Z.L., Zhou J., Barndt R.J., Parvinen M., Allis C.D., Page D.C. Proc. Natl. Acad. Sci. U.S.A. 99:8707-8712(2002) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION.
[7]	"Global, in vivo, and site-specific phosphorylation dynamics in signaling networks." Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M. Cell 127:635-648(2006) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Cervix carcinoma.
[8]	"Combining protein-based IMAC, peptide-based IMAC, and MudPIT for efficient phosphoproteomic analysis." Cantin G.T., Yi W., Lu B., Park S.K., Xu T., Lee J.-D., Yates J.R. III J. Proteome Res. 7:1346-1351(2008) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Cervix carcinoma.
[9]	"Protein lysine methyltransferase G9a acts on non-histone targets." Rathert P., Dhayalan A., Murakami M., Zhang X., Tamas R., Jurkowska R., Komatsu Y., Shinkai Y., Cheng X., Jeltsch A. Nat. Chem. Biol. 4:344-346(2008) [PubMed] [Europe PMC] [Abstract] Cited for: METHYLATION AT LYS-135, MASS SPECTROMETRY.
[10]	"A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-88 AND SER-216, MASS SPECTROMETRY. Tissue: Cervix carcinoma.
[11]	"Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis." Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M. Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-201 AND SER-216, MASS SPECTROMETRY. Tissue: Cervix carcinoma.
[12]	"System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation." Rigbolt K.T., Prokhorova T.A., Akimov V., Henningsen J., Johansen P.T., Kratchmarova I., Kassem M., Mann M., Olsen J.V., Blagoev B. Sci. Signal. 4:RS3-RS3(2011) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-216, MASS SPECTROMETRY.
[13]	"Crystal structures of human CDY proteins reveal a crotonase-like fold." Wu H., Min J., Antoshenko T., Plotnikov A.N. Proteins 76:1054-1061(2009) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.9 ANGSTROMS) OF 338-598.
[14]	"Solution structure of RSGI RUH-064, a chromo domain from human cDNA." RIKEN structural genomics initiative (RSGI) Submitted (OCT-2006) to the PDB data bank Cited for: STRUCTURE BY NMR OF 55-120.
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AF081258 mRNA. Translation: AAD22734.1.
AF081259 mRNA. Translation: AAD22735.1.
AK291601 mRNA. Translation: BAF84290.1.
AK296985 mRNA. Translation: BAG59526.1.
AL356747, AL022725, AL359643 Genomic DNA. Translation: CAC36888.2.
AL359643, AL022725, AL356747 Genomic DNA. Translation: CAH73737.1.
AL022725, AL356747, AL359643 Genomic DNA. Translation: CAI20892.1.
BC061516 mRNA. Translation: AAH61516.1.
BC108725 mRNA. Translation: AAI08726.1.
BC119682 mRNA. Translation: AAI19683.1.
AL050164 mRNA. Translation: CAB43304.1. Sequence problems.

IPI

IPI00293963.
IPI00334502.
IPI00655922.
IPI00942198.

PIR

T08789.

RefSeq

NP_001137442.1. NM_001143970.1.
NP_001137443.1. NM_001143971.1.
NP_004815.3. NM_004824.3.

UniGene

Hs.269092.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2DNT	NMR	-	A	63-120	[»]
2GTR	X-ray	1.90	A/B/C	338-598	[»]

ProteinModelPortal

Q9Y232.

ModBase

Search...

Protein-protein interaction databases

IntAct

Q9Y232. 7 interactions.

MINT

MINT-2829840.

STRING

9606.ENSP00000380718.

PTM databases

PhosphoSite

Q9Y232.

Polymorphism databases

DMDM

150421527.

Proteomic databases

PaxDb

Q9Y232.

PRIDE

Q9Y232.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

Ensembl

ENST00000328908; ENSP00000330512; ENSG00000153046.
ENST00000343762; ENSP00000340908; ENSG00000153046.
ENST00000397588; ENSP00000380718; ENSG00000153046.
ENST00000449732; ENSP00000394076; ENSG00000153046.

GeneID

9425.

KEGG

hsa:9425.

UCSC

uc003mwi.3. human.
uc003mwj.3. human.

Organism-specific databases

CTD

9425.

GeneCards

GC06P004706.

HGNC

HGNC:1811. CDYL.

HPA

CAB012249.

MIM

603778. gene.

neXtProt

NX_Q9Y232.

PharmGKB

PA26356.

GenAtlas

Search...

Phylogenomic databases

eggNOG

COG1024.

HOVERGEN

HBG006723.

OMA

LVRCNMK.

OrthoDB

EOG4KPT9K.

PhylomeDB

Q9Y232.

Gene expression databases

ArrayExpress

Q9Y232.

Bgee

Q9Y232.

CleanEx

HS_CDYL.

Genevestigator

Q9Y232.

GermOnline

ENSG00000153046. Homo sapiens.

Family and domain databases

InterPro

IPR023780. Chromo_domain.
IPR000953. Chromo_domain/shadow.
IPR016197. Chromodomain-like.
IPR023779. Chromodomain_CS.
IPR001753. Crotonase_core_superfam.
[Graphical view]

Pfam

PF00385. Chromo. 1 hit.
PF00378. ECH. 1 hit.
[Graphical view]

SMART

SM00298. CHROMO. 1 hit.
[Graphical view]

SUPFAM

SSF54160. Chromodomain-like. 1 hit.

PROSITE

PS00598. CHROMO_1. 1 hit.
PS50013. CHROMO_2. 1 hit.
[Graphical view]

ProtoNet

Search...

Other

ChiTaRS

CDYL. human.

EvolutionaryTrace

Q9Y232.

GenomeRNAi

9425.

NextBio

35306.

SOURCE

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Entry information

Entry name

CDYL1_HUMAN

Accession

Primary (citable) accession number: Q9Y232
Secondary accession number(s): A8K6D6 , B4DLG4, Q0VDG7, Q32NC5, Q5VX99, Q6P7T5, Q9BWZ2, Q9Y424

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 19, 2003
Last sequence update:	June 26, 2007
Last modified:	May 1, 2013
This is version 110 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Chordata Protein Annotation Program

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.