Q9XZU2 (Q9XZU2_DROME) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Pacman protein EMBL CAB43711.1

Gene names

Name:	pcm FlyBase FBgn0020261
Synonyms:	pacman EMBL CAB43711.1
ORF Names:	CG3291 FlyBase FBgn0020261

Organism

Drosophila melanogaster (Fruit fly) EMBL CAB43711.1

Taxonomic identifier

7227 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length	1613 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Biological process	RNA interference Inferred from mutant phenotype. Source: FlyBase dorsal closure Inferred from mutant phenotype. Source: FlyBase imaginal disc fusion, thorax closure Inferred from mutant phenotype. Source: FlyBase imaginal disc-derived wing morphogenesis Inferred from mutant phenotype. Source: FlyBase nuclear-transcribed mRNA catabolic process, exonucleolytic, 5'-3' Inferred from mutant phenotype. Source: FlyBase nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Inferred from mutant phenotype. Source: FlyBase regulation of cytoplasmic mRNA processing body assembly Inferred from mutant phenotype. Source: FlyBase spermatogenesis Inferred from mutant phenotype. Source: FlyBase wound healing Inferred from mutant phenotype. Source: FlyBase
Cellular component	cytoplasmic mRNA processing body Inferred from direct assay. Source: FlyBase
Molecular function	5'-3' exonuclease activity Inferred from electronic annotation. Source: InterPro nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9XZU2 [UniParc]. Last modified November 1, 1999. Version 1. Checksum: 6242DF05A3F33AC8	FASTA	1,613	184,150
	10 20 30 40 50 60 MGVPKFFRYI SERYPCLSEL AREHCIPEFD NLYLDMNGIV HNCSHPDDNN IHFHLEEEQI 70 80 90 100 110 120 FQEIFNYVDK LFYLIKPQRL FFLSVDGVAP RAKMNQQRSR RFRTAREAEQ QEAKAAQRGE 130 140 150 160 170 180 LREHERFDSN CITPGTEFMV RLQEGLRAFL KTKISTDPLW QRCTVILSGQ EAPGEGEHKI 190 200 210 220 230 240 MDYIRYMKTQ PDYDPNTRHC LYGLDADLII LGLCTHELHF VVLREEVKFG RNVKRTSVEE 250 260 270 280 290 300 TRFFLLHLGL LREYLELEFD ALRTDEHKLD IAQLIDDWVL MGFLVGNDFI PHLPCLHISS 310 320 330 340 350 360 NALPLLYRTY IGIYPTLGGN INENGKLNLR RLQIFISALT EVELDHFKEH ADDLKYMNNK 370 380 390 400 410 420 SEAFDMDVGE ITESQNLDSD LGALINKSML LYDDDSEEDC SDENAVLLKE FQNYKRNFYR 430 440 450 460 470 480 NKFKRDPNDE LIEELCHHYV NALQWVLDYY YRGVQSWDWY YPFHYTPFIS DLKNIEQVEI 490 500 510 520 530 540 AFHMGTPFLP FQQLLAVLPA ASAKLLPVAY HDLMLLPTSP LAEFYPLEFE SDLNGKKHDW 550 560 570 580 590 600 EAVVLIPFID EGRLLAAMLP CEAQLSLEER ERNRHGPMYV YKYSTVAQGP MPAYPPLRAL 610 620 630 640 650 660 PVLYCTEVAK WSHEIAVNLP YSVCIELPNA ARTVFFPGFP TMQHLPFDFE LRNDRVKVFE 670 680 690 700 710 720 QVSRNQNIVL KPRKRQLEDT LTAVASQYLG KVIHVGWPHL VKAIVVRVAT RDQRVDSEGI 730 740 750 760 770 780 TLNDSRRFDS ECKALQEHFI TRMGIQFANY DVLVYVRTFA GNSTEFRDKG ALMVRDSWSS 790 800 810 820 830 840 SVTGYPAQGV VADLTVWERM RKNFLNVEHY FPVGSTIFLI TDPYYGSEGT VQDPRLAYTN 850 860 870 880 890 900 GRIQVSIMVR PEPKVNAARQ LQEERDRDYL STFQVCNLLR ISGRTLGRLS GTVWVVLGPR 910 920 930 940 950 960 RQKMENVDQA QHWPAAQVSA AERGACRILL PHEQPVVLLQ PGRGSDAQLL PALPRRYRLL 970 980 990 1000 1010 1020 WRLQRSRRVR IRTGRVPQCG WPSPRRGMAN WVRQQPHMKV ERISCGSKTV CRETIELLIA 1030 1040 1050 1060 1070 1080 AVDELRSLPV KHVKLQVKPH LLIKPNVTLP DVYRSKRPVR LFDRVVIVRT IYMVPVGTKG 1090 1100 1110 1120 1130 1140 TVIGIHPVTD PNPVRLECVH AVDTFCKVLF DSPVPNCNNI HGIAEDRVYK VPEIALVIIK 1150 1160 1170 1180 1190 1200 TDEEGKKQND CELPVRDPQP NQAQDEPVRA TSSRYVTAAG STSVPITMKT QISDEFVKTR 1210 1220 1230 1240 1250 1260 SSPIARTDSY KPSSEPKPVP VPEQITNWRE RVSTPTNKPQ PAPNNWRINR SSSRQQGGSI 1270 1280 1290 1300 1310 1320 FVAPPTKTPD AAASTASTAF TAASSATLTP LDQTLALMSV LGVGEDQSSP PLQEAVQQQR 1330 1340 1350 1360 1370 1380 PPLLQQQRAP FPGQMPNLPK PPLFWQQEAQ KQEALQQEAQ QQEAQKKQQQ AHAQMEPERI 1390 1400 1410 1420 1430 1440 NSQHFYRSGQ TGAALNQPPL GAPSKRQWHE WVHPRMQHAN AFHAGVNNGY QMRPKKNIAA 1450 1460 1470 1480 1490 1500 QSTFNNNVHM HLQQPYYPNQ QQQQQQQQPL QLTEINNAPP RYSTIQDFVP IQAYRPKKLN 1510 1520 1530 1540 1550 1560 RVQPAGRQDV DATKNPSRSP VLQQPTNETI DTKASSSLPV QSAGEQVIGL MQTLEIKQPA 1570 1580 1590 1600 1610 ASQSESDGVS TGSANAPTAT TSSQAVNRRK HRVPRIGAKF DLEYILPDSP HPT

References

[1]	"Identification and developmental expression of a 5'-3' exoribonuclease from Drosophila melanogaster." Till D.D., Linz B., Seago J.E., Elgar S.J., Marujo P.E., Elias M.L., Arraiano C.M., McClellan J.A., McCarthy J.E., Newbury S.F. Mech. Dev. 79:51-55(1998) [PubMed: 10349620] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	Newbury S.F. Submitted (MAY-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AJ242529 mRNA. Translation: CAB43711.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q9XZU2.
Proteomic databases
PRIDE	Q9XZU2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Organism-specific databases
FlyBase	FBgn0020261. pcm.
Phylogenomic databases
InParanoid	Q9XZU2.
PhylomeDB	Q9XZU2.
Gene expression databases
ArrayExpress	Q9XZU2.
Bgee	Q9XZU2.
Family and domain databases
InterPro	IPR016494. 5_3_exoribonuclease_1. IPR004859. Put_53exo. [Graphical view]
Pfam	PF03159. XRN_N. 1 hit. [Graphical view]
PIRSF	PIRSF006743. Exonuclease_Xnr1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q9XZU2_DROME

Accession

Primary (citable) accession number: Q9XZU2

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1999
Last sequence update:	November 1, 1999
Last modified:	January 25, 2012
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)