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Protein
Submitted name:

Uncharacterized protein

Gene

kvs-4

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ion channel, Potassium channelSAAS annotation, Voltage-gated channelSAAS annotation

Keywords - Biological processi

Ion transport, Potassium transport, Transport

Keywords - Ligandi

Potassium

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:kvs-4Imported
ORF Names:CELE_Y48A6B.6Imported, Y48A6B.6Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome III

Organism-specific databases

WormBaseiY48A6B.6a; CE36457; WBGene00012967; kvs-4.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei231 – 25222HelicalSequence analysisAdd
BLAST
Transmembranei278 – 29922HelicalSequence analysisAdd
BLAST
Transmembranei311 – 33222HelicalSequence analysisAdd
BLAST
Transmembranei384 – 40522HelicalSequence analysisAdd
BLAST
Transmembranei417 – 43317HelicalSequence analysisAdd
BLAST
Transmembranei445 – 46622HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PRIDEiQ9XXD1.

Expressioni

Gene expression databases

ExpressionAtlasiQ9XXD1. baseline.

Structurei

3D structure databases

ProteinModelPortaliQ9XXD1.
SMRiQ9XXD1. Positions 82-469.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini85 – 17692BTB_2InterPro annotationAdd
BLAST
Domaini230 – 475246Ion_transInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the potassium channel family.SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00830000128566.
HOGENOMiHOG000272628.
OMAiNHFHIPT.
OrthoDBiEOG7CRTPP.

Family and domain databases

Gene3Di1.20.120.350. 1 hit.
InterProiIPR027359. Channel_four-helix_dom.
IPR005821. Ion_trans_dom.
IPR003968. K_chnl_volt-dep_Kv.
IPR003971. K_chnl_volt-dep_Kv9.
IPR011333. SKP1/BTB/POZ.
IPR003131. T1-type_BTB.
IPR028325. VG_K_chnl.
[Graphical view]
PANTHERiPTHR11537. PTHR11537. 1 hit.
PfamiPF02214. BTB_2. 1 hit.
PF00520. Ion_trans. 1 hit.
[Graphical view]
PRINTSiPR00169. KCHANNEL.
PR01494. KV9CHANNEL.
PR01491. KVCHANNEL.
SUPFAMiSSF54695. SSF54695. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9XXD1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNSAIMQGAA MATSHGIARL NRHNAQRNHF HIPTANRLFY QLQTPCTSTE
60 70 80 90 100
EERRTVQTDD VAEIGMQRPD YQMYCGEEEI SEQFVKLNVG GQRFMLRKDT
110 120 130 140 150
IRRRGVGRLL DLINKPVADS NADAFFSSTS EFYFERPPSL FHIVYQFYLN
160 170 180 190 200
GVIHQPSNLC PVDIIEELEY WRIIPDQYLA SCCCAQQIDD DDEEVEEQDK
210 220 230 240 250
PNLFKTLRFG EIRRCVWNII EEPASSGKAQ AFAVCSVVFV LISISGLVLG
260 270 280 290 300
SLPELQVATK QRNNLTGEEF TEMEPMPILG YIEYVCIVWF TMEYGLKMLV
310 320 330 340 350
SAERSKTFRQ LLNIIDLLAI LPFIIEMLLL IFGISTEQLR DLKGAFLVIR
360 370 380 390 400
ILRVLRVIRV LKLGRYSSGL QMFGKTLKAS FRQLGMMAMV VMTGVIFFST
410 420 430 440 450
LVYFLEKDEP ASKFHSIPAA CWWCIVTMTT VGYGDLTPVT VPGKLVATGA
460 470 480 490 500
IACGVLVLAL PITIIVDNFM KVAETERPAG GNRYRTSQYP KATKSEQMIL

KVT
Length:503
Mass (Da):56,966
Last modified:September 13, 2004 - v3
Checksum:i1611A5E0417E016C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284603 Genomic DNA. Translation: CAA19530.3.
PIRiT26983.
RefSeqiNP_001022888.1. NM_001027717.2.
UniGeneiCel.9760.

Genome annotation databases

EnsemblMetazoaiY48A6B.6a; Y48A6B.6a; WBGene00012967.
GeneIDi190011.
UCSCiY48A6B.6b. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284603 Genomic DNA. Translation: CAA19530.3.
PIRiT26983.
RefSeqiNP_001022888.1. NM_001027717.2.
UniGeneiCel.9760.

3D structure databases

ProteinModelPortaliQ9XXD1.
SMRiQ9XXD1. Positions 82-469.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiQ9XXD1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiY48A6B.6a; Y48A6B.6a; WBGene00012967.
GeneIDi190011.
UCSCiY48A6B.6b. c. elegans.

Organism-specific databases

CTDi190011.
WormBaseiY48A6B.6a; CE36457; WBGene00012967; kvs-4.

Phylogenomic databases

GeneTreeiENSGT00830000128566.
HOGENOMiHOG000272628.
OMAiNHFHIPT.
OrthoDBiEOG7CRTPP.

Miscellaneous databases

NextBioi944378.

Gene expression databases

ExpressionAtlasiQ9XXD1. baseline.

Family and domain databases

Gene3Di1.20.120.350. 1 hit.
InterProiIPR027359. Channel_four-helix_dom.
IPR005821. Ion_trans_dom.
IPR003968. K_chnl_volt-dep_Kv.
IPR003971. K_chnl_volt-dep_Kv9.
IPR011333. SKP1/BTB/POZ.
IPR003131. T1-type_BTB.
IPR028325. VG_K_chnl.
[Graphical view]
PANTHERiPTHR11537. PTHR11537. 1 hit.
PfamiPF02214. BTB_2. 1 hit.
PF00520. Ion_trans. 1 hit.
[Graphical view]
PRINTSiPR00169. KCHANNEL.
PR01494. KV9CHANNEL.
PR01491. KVCHANNEL.
SUPFAMiSSF54695. SSF54695. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ9XXD1_CAEEL
AccessioniPrimary (citable) accession number: Q9XXD1
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1999
Last sequence update: September 13, 2004
Last modified: May 11, 2016
This is version 117 of the entry and version 3 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.