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Protein

40S ribosomal protein S15

Gene

rps-15

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Negatively regulates lifespan.1 Publication

GO - Molecular functioni

GO - Biological processi

  • determination of adult lifespan Source: WormBase
  • ribosomal small subunit assembly Source: GO_Central
  • translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-CEL-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-CEL-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-CEL-6791226. Major pathway of rRNA processing in the nucleolus.
R-CEL-72689. Formation of a pool of free 40S subunits.
R-CEL-72695. Formation of the ternary complex, and subsequently, the 43S complex.
R-CEL-72702. Ribosomal scanning and start codon recognition.
R-CEL-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-CEL-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-CEL-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S15
Gene namesi
Name:rps-15Imported
ORF Names:F36A2.6
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiF36A2.6; CE09945; WBGene00004484; rps-15.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methionineiRemoved1 Publication
Chaini2 – 15115040S ribosomal protein S15PRO_0000130037Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei2 – 21N-acetylalanine1 Publication

Keywords - PTMi

Acetylation

Proteomic databases

EPDiQ9XVP0.
PaxDbiQ9XVP0.
PRIDEiQ9XVP0.

PTM databases

iPTMnetiQ9XVP0.

Expressioni

Gene expression databases

BgeeiWBGene00004484.

Interactioni

Protein-protein interaction databases

BioGridi38126. 10 interactions.
IntActiQ9XVP0. 12 interactions.
STRINGi6239.F36A2.6.1.

Structurei

3D structure databases

ProteinModelPortaliQ9XVP0.
SMRiQ9XVP0. Positions 11-136.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S19P family.Sequence analysis

Phylogenomic databases

eggNOGiKOG0898. Eukaryota.
COG0185. LUCA.
GeneTreeiENSGT00390000000475.
HOGENOMiHOG000111561.
InParanoidiQ9XVP0.
KOiK02958.
OMAiQHGSPGM.
OrthoDBiEOG091G0ZRG.
PhylomeDBiQ9XVP0.

Family and domain databases

Gene3Di3.30.860.10. 1 hit.
HAMAPiMF_00531. Ribosomal_S19. 1 hit.
InterProiIPR002222. Ribosomal_S19.
IPR020934. Ribosomal_S19_CS.
IPR023575. Ribosomal_S19_SF.
IPR005713. Ribosomal_S19A/S15e.
[Graphical view]
PANTHERiPTHR11880. PTHR11880. 1 hit.
PfamiPF00203. Ribosomal_S19. 1 hit.
[Graphical view]
PIRSFiPIRSF002144. Ribosomal_S19. 1 hit.
PRINTSiPR00975. RIBOSOMALS19.
SUPFAMiSSF54570. SSF54570. 1 hit.
TIGRFAMsiTIGR01025. uS19_arch. 1 hit.
PROSITEiPS00323. RIBOSOMAL_S19. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9XVP0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATQDDAHLA ELKKKRTFRK FMYRGVDLDQ LLDMSREQFT KLLPCRMRRR
60 70 80 90 100
LDRGLKRKHL ALIAKVQKAK KAAGVLEKPA TVKTHLRDMI ILPELVGGVI
110 120 130 140 150
GIYNGKVFNQ TEIKPEMIGF YLGEFAISYK PVKHGRPGIG ATHSSRFIPL

K
Length:151
Mass (Da):17,244
Last modified:January 23, 2007 - v3
Checksum:i146D97D8669C100C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z81077 Genomic DNA. Translation: CAB03065.1.
PIRiT21828.
RefSeqiNP_492384.1. NM_059983.5.
UniGeneiCel.8614.

Genome annotation databases

EnsemblMetazoaiF36A2.6.1; F36A2.6.1; WBGene00004484.
F36A2.6.2; F36A2.6.2; WBGene00004484.
GeneIDi172693.
KEGGicel:CELE_F36A2.6.
UCSCiF36A2.6.2. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z81077 Genomic DNA. Translation: CAB03065.1.
PIRiT21828.
RefSeqiNP_492384.1. NM_059983.5.
UniGeneiCel.8614.

3D structure databases

ProteinModelPortaliQ9XVP0.
SMRiQ9XVP0. Positions 11-136.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi38126. 10 interactions.
IntActiQ9XVP0. 12 interactions.
STRINGi6239.F36A2.6.1.

PTM databases

iPTMnetiQ9XVP0.

Proteomic databases

EPDiQ9XVP0.
PaxDbiQ9XVP0.
PRIDEiQ9XVP0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF36A2.6.1; F36A2.6.1; WBGene00004484.
F36A2.6.2; F36A2.6.2; WBGene00004484.
GeneIDi172693.
KEGGicel:CELE_F36A2.6.
UCSCiF36A2.6.2. c. elegans.

Organism-specific databases

CTDi172693.
WormBaseiF36A2.6; CE09945; WBGene00004484; rps-15.

Phylogenomic databases

eggNOGiKOG0898. Eukaryota.
COG0185. LUCA.
GeneTreeiENSGT00390000000475.
HOGENOMiHOG000111561.
InParanoidiQ9XVP0.
KOiK02958.
OMAiQHGSPGM.
OrthoDBiEOG091G0ZRG.
PhylomeDBiQ9XVP0.

Enzyme and pathway databases

ReactomeiR-CEL-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-CEL-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-CEL-6791226. Major pathway of rRNA processing in the nucleolus.
R-CEL-72689. Formation of a pool of free 40S subunits.
R-CEL-72695. Formation of the ternary complex, and subsequently, the 43S complex.
R-CEL-72702. Ribosomal scanning and start codon recognition.
R-CEL-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-CEL-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-CEL-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Miscellaneous databases

PROiQ9XVP0.

Gene expression databases

BgeeiWBGene00004484.

Family and domain databases

Gene3Di3.30.860.10. 1 hit.
HAMAPiMF_00531. Ribosomal_S19. 1 hit.
InterProiIPR002222. Ribosomal_S19.
IPR020934. Ribosomal_S19_CS.
IPR023575. Ribosomal_S19_SF.
IPR005713. Ribosomal_S19A/S15e.
[Graphical view]
PANTHERiPTHR11880. PTHR11880. 1 hit.
PfamiPF00203. Ribosomal_S19. 1 hit.
[Graphical view]
PIRSFiPIRSF002144. Ribosomal_S19. 1 hit.
PRINTSiPR00975. RIBOSOMALS19.
SUPFAMiSSF54570. SSF54570. 1 hit.
TIGRFAMsiTIGR01025. uS19_arch. 1 hit.
PROSITEiPS00323. RIBOSOMAL_S19. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS15_CAEEL
AccessioniPrimary (citable) accession number: Q9XVP0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 22, 2005
Last sequence update: January 23, 2007
Last modified: September 7, 2016
This is version 116 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.