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Protein
Submitted name:

Proteasome Regulatory Particle, ATPase-like

Gene

rpt-6

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandATP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

ReactomeiR-CEL-1234176. Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha.
R-CEL-1236978. Cross-presentation of soluble exogenous antigens (endosomes).
R-CEL-195253. Degradation of beta-catenin by the destruction complex.
R-CEL-382556. ABC-family proteins mediated transport.
R-CEL-4608870. Asymmetric localization of PCP proteins.
R-CEL-4641258. Degradation of DVL.
R-CEL-5632684. Hedgehog 'on' state.
R-CEL-5689603. UCH proteinases.
R-CEL-5689880. Ub-specific processing proteases.
R-CEL-68949. Orc1 removal from chromatin.
R-CEL-69229. Ubiquitin-dependent degradation of Cyclin D1.
R-CEL-69601. Ubiquitin Mediated Degradation of Phosphorylated Cdc25A.
R-CEL-8941858. Regulation of RUNX3 expression and activity.
R-CEL-983168. Antigen processing: Ubiquitination & Proteasome degradation.

Names & Taxonomyi

Protein namesi
Submitted name:
Proteasome Regulatory Particle, ATPase-likeImported
Gene namesi
Name:rpt-6Imported
ORF Names:CELE_Y49E10.1Imported, Y49E10.1Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome III

Organism-specific databases

WormBaseiY49E10.1; CE22219; WBGene00004506; rpt-6.

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

ProteasomeImported

PTM / Processingi

Proteomic databases

EPDiQ9XTT9.
PaxDbiQ9XTT9.
PeptideAtlasiQ9XTT9.

Expressioni

Gene expression databases

BgeeiWBGene00004506.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

DIPiDIP-27139N.
IntActiQ9XTT9. 4 interactors.
MINTiMINT-210855.
STRINGi6239.Y49E10.1.1.

Structurei

3D structure databases

ProteinModelPortaliQ9XTT9.
SMRiQ9XTT9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini192 – 331AAAInterPro annotationAdd BLAST140

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili38 – 79Sequence analysisAdd BLAST42

Sequence similaritiesi

Belongs to the AAA ATPase family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0728. Eukaryota.
COG1222. LUCA.
GeneTreeiENSGT00550000074947.
HOGENOMiHOG000225143.
InParanoidiQ9XTT9.
KOiK03066.
OMAiHGNNQEA.
OrthoDBiEOG091G096W.
PhylomeDBiQ9XTT9.

Family and domain databases

InterProiView protein in InterPro
IPR005937. 26S_Psome_P45.
IPR003593. AAA+_ATPase.
IPR003959. ATPase_AAA_core.
IPR003960. ATPase_AAA_CS.
IPR027417. P-loop_NTPase.
PfamiView protein in Pfam
PF00004. AAA. 1 hit.
SMARTiView protein in SMART
SM00382. AAA. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR01242. 26Sp45. 1 hit.
PROSITEiView protein in PROSITE
PS00674. AAA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9XTT9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAPPASTASS ADPSKPTAQK LTEESDEKTL RKYFSTKVDD AQQKVADKSQ
60 70 80 90 100
NVRRLQAQRN ELNTKVRMLK EELQQLHEQG SYVGEVSKAM DKKKVLVKVH
110 120 130 140 150
PEGKYVVDVD KSIDINSLNT GARVALRADS YALHKLLPNK VDPLVSLMMV
160 170 180 190 200
EKVPDSTYEM VGGLDKQIKE IKEVIELPVK HPELFDALGI AQPKGVLLFG
210 220 230 240 250
PPGTGKTLLA RAVAHHTECT FIRVSGSELV QKFIGEGARM VRELFVMARE
260 270 280 290 300
HAPSIIFMDE IDSIGSSRVE GSSGGDSEVQ RTMLELLNQL DGFEATKNIK
310 320 330 340 350
VIMATNRIDI LDPALLRPGR IDRKIEFPAP DEKARADILK IHSRKMNLMR
360 370 380 390 400
GINMAKIAEQ IPGASGAEVK SVCTEAGMFA LRERRIHVTQ EDFEMAVGKV
410
MQKDSEKNMS IKKLWK
Length:416
Mass (Da):46,250
Last modified:November 1, 1999 - v1
Checksum:i8F6E840EF99B1298
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284603 Genomic DNA. Translation: CAB11558.1.
PIRiT27048.
RefSeqiNP_499609.1. NM_067208.4.
UniGeneiCel.22621.

Genome annotation databases

EnsemblMetazoaiY49E10.1; Y49E10.1; WBGene00004506.
GeneIDi176661.
KEGGicel:CELE_Y49E10.1.
UCSCiY49E10.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284603 Genomic DNA. Translation: CAB11558.1.
PIRiT27048.
RefSeqiNP_499609.1. NM_067208.4.
UniGeneiCel.22621.

3D structure databases

ProteinModelPortaliQ9XTT9.
SMRiQ9XTT9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-27139N.
IntActiQ9XTT9. 4 interactors.
MINTiMINT-210855.
STRINGi6239.Y49E10.1.1.

Proteomic databases

EPDiQ9XTT9.
PaxDbiQ9XTT9.
PeptideAtlasiQ9XTT9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiY49E10.1; Y49E10.1; WBGene00004506.
GeneIDi176661.
KEGGicel:CELE_Y49E10.1.
UCSCiY49E10.1. c. elegans.

Organism-specific databases

CTDi176661.
WormBaseiY49E10.1; CE22219; WBGene00004506; rpt-6.

Phylogenomic databases

eggNOGiKOG0728. Eukaryota.
COG1222. LUCA.
GeneTreeiENSGT00550000074947.
HOGENOMiHOG000225143.
InParanoidiQ9XTT9.
KOiK03066.
OMAiHGNNQEA.
OrthoDBiEOG091G096W.
PhylomeDBiQ9XTT9.

Enzyme and pathway databases

ReactomeiR-CEL-1234176. Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha.
R-CEL-1236978. Cross-presentation of soluble exogenous antigens (endosomes).
R-CEL-195253. Degradation of beta-catenin by the destruction complex.
R-CEL-382556. ABC-family proteins mediated transport.
R-CEL-4608870. Asymmetric localization of PCP proteins.
R-CEL-4641258. Degradation of DVL.
R-CEL-5632684. Hedgehog 'on' state.
R-CEL-5689603. UCH proteinases.
R-CEL-5689880. Ub-specific processing proteases.
R-CEL-68949. Orc1 removal from chromatin.
R-CEL-69229. Ubiquitin-dependent degradation of Cyclin D1.
R-CEL-69601. Ubiquitin Mediated Degradation of Phosphorylated Cdc25A.
R-CEL-8941858. Regulation of RUNX3 expression and activity.
R-CEL-983168. Antigen processing: Ubiquitination & Proteasome degradation.

Miscellaneous databases

PROiPR:Q9XTT9.

Gene expression databases

BgeeiWBGene00004506.

Family and domain databases

InterProiView protein in InterPro
IPR005937. 26S_Psome_P45.
IPR003593. AAA+_ATPase.
IPR003959. ATPase_AAA_core.
IPR003960. ATPase_AAA_CS.
IPR027417. P-loop_NTPase.
PfamiView protein in Pfam
PF00004. AAA. 1 hit.
SMARTiView protein in SMART
SM00382. AAA. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR01242. 26Sp45. 1 hit.
PROSITEiView protein in PROSITE
PS00674. AAA. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ9XTT9_CAEEL
AccessioniPrimary (citable) accession number: Q9XTT9
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1999
Last sequence update: November 1, 1999
Last modified: June 7, 2017
This is version 148 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.