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Protein
Submitted name:

SCAVenger receptor (CD36 family) related

Gene

scav-3

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Keywords - Molecular functioni

ReceptorImported

Enzyme and pathway databases

ReactomeiR-CEL-114608. Platelet degranulation.
R-CEL-1236973. Cross-presentation of particulate exogenous antigens (phagosomes).
R-CEL-6798695. Neutrophil degranulation.
R-CEL-8856825. Cargo recognition for clathrin-mediated endocytosis.
R-CEL-8856828. Clathrin-mediated endocytosis.

Names & Taxonomyi

Protein namesi
Submitted name:
SCAVenger receptor (CD36 family) relatedImported
Gene namesi
Name:scav-3Imported
ORF Names:CELE_Y49E10.20Imported, Y49E10.20Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome III

Organism-specific databases

WormBaseiY49E10.20; CE22235; WBGene00013039; scav-3.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei478 – 505HelicalSequence analysisAdd BLAST28

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

EPDiQ9XTT3.
PaxDbiQ9XTT3.
PeptideAtlasiQ9XTT3.

Expressioni

Gene expression databases

BgeeiWBGene00013039.

Interactioni

Protein-protein interaction databases

STRINGi6239.Y49E10.20.2.

Structurei

3D structure databases

ProteinModelPortaliQ9XTT3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the CD36 family.SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiKOG3776. Eukaryota.
ENOG410XS17. LUCA.
GeneTreeiENSGT00530000062927.
HOGENOMiHOG000019541.
InParanoidiQ9XTT3.
KOiK12384.
OMAiMKARARV.
OrthoDBiEOG091G06D3.
PhylomeDBiQ9XTT3.

Family and domain databases

InterProiIPR002159. CD36_fam.
[Graphical view]
PANTHERiPTHR11923. PTHR11923. 2 hits.
PfamiPF01130. CD36. 1 hit.
[Graphical view]
PRINTSiPR01609. CD36FAMILY.

Sequencei

Sequence statusi: Complete.

Q9XTT3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLKKAPCLFG SAIILGLLLA AAGVLLLIGI PIDRIVNRQV IDQDFLGYTR
60 70 80 90 100
DENGTEVPNA MTKSWLKPLY AMQLNIWMFN VTNVDGILKR HEKPNLHEIG
110 120 130 140 150
PFVFDEVQEK VYHRFADNDT RVFYKNQKLY HFNKNASCPT CHLDMKVTIP
160 170 180 190 200
NIVFQKLIDA ADVTIFGVRI KFAIESVLKM VSEAPYITVK VSDALFDGYE
210 220 230 240 250
DPIIDIVCKN KILQFLCETN SLQRRVGFFY GQNGTTDGIY EVDAGVPSPS
260 270 280 290 300
KIGHLYTWNN MTEMPEGTWD TKYARMINGT DGQLFSPMLK REDRLTIFVP
310 320 330 340 350
QICRSIQMEY TKDVAVNGVP SWRYAPPLDL YDPALPQNRA FCNKNGMPRY
360 370 380 390 400
FDNTTVQIEN CLPAGLIDLS RCQAGNPRVY LSNPHFYNSP MELWHSVTGL
410 420 430 440 450
SVPTASNDLT VVDIEPTAGV PTQAKRIMQI NVGMVKGSLS VTENTTNVVV
460 470 480 490 500
PVLWMNETAY FDQGTRDQLI NIFNAKHYSF IGGVISLSLG LIAWLAVFVV
510 520 530
IIVYSRQSDE EEYGRLVLED EDEEPAQDEN AVLA
Length:534
Mass (Da):60,182
Last modified:March 1, 2003 - v3
Checksum:iE90F6B87D5E65311
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284603 Genomic DNA. Translation: CAB11566.3.
PIRiT27054.
RefSeqiNP_499625.2. NM_067224.5.
UniGeneiCel.34188.

Genome annotation databases

EnsemblMetazoaiY49E10.20; Y49E10.20; WBGene00013039.
GeneIDi176673.
KEGGicel:CELE_Y49E10.20.
UCSCiY49E10.20.1. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284603 Genomic DNA. Translation: CAB11566.3.
PIRiT27054.
RefSeqiNP_499625.2. NM_067224.5.
UniGeneiCel.34188.

3D structure databases

ProteinModelPortaliQ9XTT3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.Y49E10.20.2.

Proteomic databases

EPDiQ9XTT3.
PaxDbiQ9XTT3.
PeptideAtlasiQ9XTT3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiY49E10.20; Y49E10.20; WBGene00013039.
GeneIDi176673.
KEGGicel:CELE_Y49E10.20.
UCSCiY49E10.20.1. c. elegans.

Organism-specific databases

CTDi176673.
WormBaseiY49E10.20; CE22235; WBGene00013039; scav-3.

Phylogenomic databases

eggNOGiKOG3776. Eukaryota.
ENOG410XS17. LUCA.
GeneTreeiENSGT00530000062927.
HOGENOMiHOG000019541.
InParanoidiQ9XTT3.
KOiK12384.
OMAiMKARARV.
OrthoDBiEOG091G06D3.
PhylomeDBiQ9XTT3.

Enzyme and pathway databases

ReactomeiR-CEL-114608. Platelet degranulation.
R-CEL-1236973. Cross-presentation of particulate exogenous antigens (phagosomes).
R-CEL-6798695. Neutrophil degranulation.
R-CEL-8856825. Cargo recognition for clathrin-mediated endocytosis.
R-CEL-8856828. Clathrin-mediated endocytosis.

Gene expression databases

BgeeiWBGene00013039.

Family and domain databases

InterProiIPR002159. CD36_fam.
[Graphical view]
PANTHERiPTHR11923. PTHR11923. 2 hits.
PfamiPF01130. CD36. 1 hit.
[Graphical view]
PRINTSiPR01609. CD36FAMILY.
ProtoNetiSearch...

Entry informationi

Entry nameiQ9XTT3_CAEEL
AccessioniPrimary (citable) accession number: Q9XTT3
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1999
Last sequence update: March 1, 2003
Last modified: November 30, 2016
This is version 100 of the entry and version 3 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.