Unreviewed, UniProtKB/TrEMBL Q9XTS1 (Q9XTS1_CAEEL)

Names and origin

Protein names

Submitted name:
    Protein F47G4.4, confirmed by transcript evidence EMBL CAB16313.1

Gene names

ORF Names:

F47G4.4 EMBL CAB16313.1

Organism

Caenorhabditis elegans [Complete proteome]

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	722 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
	Q8WQF7	1	EBI-312192,EBI-322693
mat-2	O18191	1	EBI-312192,EBI-329825
mei-1	P34808	1	EBI-312192,EBI-323248
nhr-2	Q10902	1	EBI-312192,EBI-312197
php-3	Q9XW88	1	EBI-312192,EBI-316766

Sequences

	Sequence		Length	Mass (Da)
	Q9XTS1-1 [UniParc]. Last modified November 1, 1999. Version 1. Checksum: E9534C22CBACE7F6	FASTA	722	78,633
	10 20 30 40 50 60 MKIEVVSALP HSTVHSAVLS RRHRSVICAG PYEVLPLEGC SEPLPSTSTL SELPIECLRL 70 80 90 100 110 120 STDERTIGAA TNAILKVADI ITGHEVRNLT GHTLPITSLA ASKFNPYCWY TGSSDCDWTQ 130 140 150 160 170 180 WDTRMNPSKI FGSKTPGVVR SIALSPGDRY VAVGTDETIQ IFDARQREFI KTFNCSGHAL 190 200 210 220 230 240 ELHPSDVLLS SVGHDRIVRF FCLETFEMIS QSDPFLDDIQ ASAFDTHVMI AATNDSINLL 250 260 270 280 290 300 TWEPCCDILT TVPLKNVEKV VNVNANGLDL DFICIGDNTE RLEMRTYAIE ELLSYSPSHE 310 320 330 340 350 360 LCGSIYEEDE DVDNSPIDEV KALPELTELS NLPPRSPGLS CEETETSASP VNSSSSHSSP 370 380 390 400 410 420 TSPVKPAPVK HRSASQKLPG KSTKTLNPKP AGSTRSVTPV STKPPRTFGT AKSVIVSSKP 430 440 450 460 470 480 SLSGYNNRAN PSPSMSDLRT TKSMAGSTTS LLSERAPKKR STSSRRNQEP ITITYIGRPR 490 500 510 520 530 540 TPSEGDVAST VSSSTSRNRR PSPSVAKKTS PPSIYAITSS PAKRASSTAS GPTARRQNST 550 560 570 580 590 600 SSVTSTTSAK TPVGVWGACI ETVHDIGIVA KKENRNIRRL KMLTSRRTSN VDIPPEVCSD 610 620 630 640 650 660 EQLVLTATRI LSRRNDWSLN SCHAYLPVII DNIASVDVTN RAIALEGLAA IADTLGERLV 670 680 690 700 710 720 KFASMNSHRI GVDVAAEERA EKAKACVQHL RSLVKKRDWY YKQLDEPSIL KLDPILELLK KI

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.

Cross-references

Sequence databases
EMBLGenBankDDBJ	Z99171 Genomic DNA. Translation: CAB16313.1.
PIR	T22359.
RefSeq	NP_493453.1.
UniGene	Cel.4941
3D structure databases
ModBase	Search...
Protein-protein interaction databases
DIP	DIP:26185N.
IntAct	Q9XTS1. 5 interactions.
Genome annotation databases
Ensembl	F47G4.4. Caenorhabditis elegans. [Contig view]
GeneID	173271.
KEGG	cel:F47G4.4.
Organism-specific databases
WormBase	WBGene00009825. F47G4.4.
WormPep	F47G4.4. CE18702. [WorfDB]
Phylogenomic databases
OMA	Q9XTS1. NTERLEM.
Gene expression databases
ArrayExpress	Q9XTS1.
Family and domain databases
InterPro	IPR015943. WD40/YVTN_repeat-like. IPR001680. WD40_repeat. IPR019781. WD40_repeat_sg. [Graphical view]
Gene3D	G3DSA:2.130.10.10. WD40/YVTN_repeat-like. 1 hit.
Pfam	PF00400. WD40. 1 hit. [Graphical view]
SMART	SM00320. WD40. 3 hits. [Graphical view]
ProtoNet	Search...
Other Resources
NextBio	878947.

Entry information

Entry name

Q9XTS1_CAEEL

Accession

Primary (citable) accession number: Q9XTS1

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1999
Last sequence update:	November 1, 1999
Last modified:	June 16, 2009
This is version 58 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)