Q9XTS1 (Q9XTS1_CAEEL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Protein F47G4.4 EMBL CAB16313.1

Gene names

ORF Names:

F47G4.4 EMBL CAB16313.1 WormBase F47G4.4

Organism

Caenorhabditis elegans

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	722 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular function	protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
mei-1	P34808	3	EBI-312192,EBI-323248

Sequences

	Sequence		Length	Mass (Da)
	Q9XTS1 [UniParc]. Last modified November 1, 1999. Version 1. Checksum: E9534C22CBACE7F6	FASTA	722	78,633
	10 20 30 40 50 60 MKIEVVSALP HSTVHSAVLS RRHRSVICAG PYEVLPLEGC SEPLPSTSTL SELPIECLRL 70 80 90 100 110 120 STDERTIGAA TNAILKVADI ITGHEVRNLT GHTLPITSLA ASKFNPYCWY TGSSDCDWTQ 130 140 150 160 170 180 WDTRMNPSKI FGSKTPGVVR SIALSPGDRY VAVGTDETIQ IFDARQREFI KTFNCSGHAL 190 200 210 220 230 240 ELHPSDVLLS SVGHDRIVRF FCLETFEMIS QSDPFLDDIQ ASAFDTHVMI AATNDSINLL 250 260 270 280 290 300 TWEPCCDILT TVPLKNVEKV VNVNANGLDL DFICIGDNTE RLEMRTYAIE ELLSYSPSHE 310 320 330 340 350 360 LCGSIYEEDE DVDNSPIDEV KALPELTELS NLPPRSPGLS CEETETSASP VNSSSSHSSP 370 380 390 400 410 420 TSPVKPAPVK HRSASQKLPG KSTKTLNPKP AGSTRSVTPV STKPPRTFGT AKSVIVSSKP 430 440 450 460 470 480 SLSGYNNRAN PSPSMSDLRT TKSMAGSTTS LLSERAPKKR STSSRRNQEP ITITYIGRPR 490 500 510 520 530 540 TPSEGDVAST VSSSTSRNRR PSPSVAKKTS PPSIYAITSS PAKRASSTAS GPTARRQNST 550 560 570 580 590 600 SSVTSTTSAK TPVGVWGACI ETVHDIGIVA KKENRNIRRL KMLTSRRTSN VDIPPEVCSD 610 620 630 640 650 660 EQLVLTATRI LSRRNDWSLN SCHAYLPVII DNIASVDVTN RAIALEGLAA IADTLGERLV 670 680 690 700 710 720 KFASMNSHRI GVDVAAEERA EKAKACVQHL RSLVKKRDWY YKQLDEPSIL KLDPILELLK KI

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	Z99171 Genomic DNA. Translation: CAB16313.1.
PIR	T22359.
RefSeq	NP_493453.1. NM_061052.2.
UniGene	Cel.4941.
3D structure databases
ProteinModelPortal	Q9XTS1.
SMR	Q9XTS1. Positions 46-122, 138-201.
ModBase	Search...
Protein-protein interaction databases
DIP	DIP-26185N.
IntAct	Q9XTS1. 5 interactions.
MINT	MINT-1045207.
STRING	Q9XTS1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	F47G4.4.1; F47G4.4.1; F47G4.4. F47G4.4.2; F47G4.4.2; F47G4.4.
GeneID	173271.
KEGG	cel:F47G4.4.
UCSC	F47G4.4.1. c. elegans.
Organism-specific databases
CTD	173271.
WormBase	F47G4.4; CE18702; WBGene00009825.
Phylogenomic databases
eggNOG	meNOG13077.
GeneTree	EMGT00050000013774.
InParanoid	Q9XTS1.
OMA	NTERLEM.
PhylomeDB	Q9XTS1.
Gene expression databases
ArrayExpress	Q9XTS1.
Family and domain databases
InterPro	IPR015943. WD40/YVTN_repeat-like_dom. IPR001680. WD40_repeat. IPR011046. WD40_repeat-like_dom. [Graphical view]
Gene3D	G3DSA:2.130.10.10. WD40/YVTN_repeat-like. 1 hit.
Pfam	PF00400. WD40. 1 hit. [Graphical view]
SMART	SM00320. WD40. 3 hits. [Graphical view]
SUPFAM	SSF50978. WD40_like. 1 hit.
ProtoNet	Search...
Other
NextBio	878947.

Entry information

Entry name

Q9XTS1_CAEEL

Accession

Primary (citable) accession number: Q9XTS1

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1999
Last sequence update:	November 1, 1999
Last modified:	January 25, 2012
This is version 79 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)