Unreviewed, UniProtKB/TrEMBL Q9XTB0 (Q9XTB0_CAEEL)

Names and origin

Protein names

Submitted name:
    Protein F11E6.1a, partially confirmed by transcript evidence EMBL CAB02924.1

Gene names

ORF Names:

F11E6.1 WormBase WBGene00008706 WormPep F11E6.1a, F11E6.1a EMBL CAB02924.1

Organism

Caenorhabditis elegans [Complete proteome]

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	522 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro lysosome organization Inferred from electronic annotation. Source: InterPro sphingolipid metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	lysosome Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro glucosylceramidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9XTB0-1 [UniParc]. Last modified November 1, 1999. Version 1. Checksum: 3CD73EE50CFBA7C7	FASTA	522	59,088
	10 20 30 40 50 60 MSRWKVVILC LLSFMFEIGH ASFQCNPKTY DGAFLNIVCV CNATFCDEIE PIGEIAEGKA 70 80 90 100 110 120 IVYRSSLDGD RLKRMSMKMK EKLRKNESVN VTITIDASER FQNIFGFGGA FTDSAGDQFV 130 140 150 160 170 180 SLSETLQNYI VDSYFGKNGL EYNIGRVPIA SCDFSTHEYS YDDVHDDFEL KHFALPDEDL 190 200 210 220 230 240 KLKIPFIKKA IEKTEGNIQL FASPWSAPGW MKVTGRMRGG GAMRNDKRVY QAYADYFFKF 250 260 270 280 290 300 FEAYSSHAIT FWGLTIQNEP STGADMAWRW QTMNYTAETM RDFLKKYLGP KLKENKLTET 310 320 330 340 350 360 LKVMVLDDGR GLLPGWADTI FNDPEATKYA DGVAVHWYGN LYSPAVLLDI TQRHHPTKFI 370 380 390 400 410 420 FGTEACAGYF GHHGPIMGDW FRAESYADDI ITDLNHHVTG WTDWNLCLDE TGGPNWAYNV 430 440 450 460 470 480 VDSPIIVNRT AQEFYKQPMF YALGHFSKFL PRGSTRVFTK IEGNLAVSAT SVVIEGGRRA 490 500 510 520 TVILSKASNS LLTRIVDSST GFSIVLNLPP RSIHTVIWKK RK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Lectin affinity capture, isotope-coded tagging and mass spectrometry to identify N-linked glycoproteins." Kaji H., Saito H., Yamauchi Y., Shinkawa T., Taoka M., Hirabayashi J., Kasai K., Takahashi N., Isobe T. Nat. Biotechnol. 21:667-672(2003) [PubMed: 12754521] [Abstract] Cited for: GLYCOSYLATION AT ASN-274, MASS SPECTROMETRY.
[2]	"Proteomics reveals N-linked glycoprotein diversity in Caenorhabditis elegans and suggests an atypical translocation mechanism for integral membrane proteins." Kaji H., Kamiie J., Kawakami H., Kido K., Yamauchi Y., Shinkawa T., Taoka M., Takahashi N., Isobe T. Mol. Cell. Proteomics 6:2100-2109(2007) [PubMed: 17761667] [Abstract] Cited for: GLYCOSYLATION [LARGE SCALE ANALYSIS], MASS SPECTROMETRY.
[3]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AL031254, Z81058 Genomic DNA. Translation: CAA20283.1. Z81058, AL031254 Genomic DNA. Translation: CAB02924.1.
PIR	T18583.
RefSeq	NP_503119.1.
UniGene	Cel.13150
3D structure databases
HSSP	HSSP built from PDB template 1OGS based on UniProtKB P04062.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q9XTB0. 1 interaction.
Protein family/group databases
CAZy	GH30. Glycoside Hydrolase Family 30.
Genome annotation databases
Ensembl	F11E6.1. Caenorhabditis elegans. [Contig view]
GeneID	178535.
NMPDR	fig|6239.3.peg.16381.
Organism-specific databases
WormBase	WBGene00008706. F11E6.1.
WormPep	F11E6.1a. CE20669. [WorfDB]
Phylogenomic databases
OMA	Q9XTB0. FRAESYA.
Gene expression databases
ArrayExpress	Q9XTB0.
Family and domain databases
InterPro	IPR001139. Glyco_hydro_30. IPR013781. Glyco_hydro_sg_catalytic. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHER	PTHR11069. Glyco_hydro_30. 1 hit.
Pfam	PF02055. Glyco_hydro_30. 1 hit. [Graphical view]
PRINTS	PR00843. GLHYDRLASE30.
ProtoNet	Search...
Other Resources
NextBio	901518.

Entry information

Entry name

Q9XTB0_CAEEL

Accession

Primary (citable) accession number: Q9XTB0

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1999
Last sequence update:	November 1, 1999
Last modified:	June 16, 2009
This is version 53 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)