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Protein
Submitted name:

Fas antigen spliced variant

Gene
N/A
Organism
Oryctolagus cuniculus (Rabbit)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Fas antigen spliced variantImported
OrganismiOryctolagus cuniculus (Rabbit)
Taxonomic identifieri9986 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresLagomorphaLeporidaeOryctolagus

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei162 – 17918HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020Sequence analysisAdd
BLAST
Chaini21 – 263243Sequence analysisPRO_5004336878Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi9986.ENSOCUP00000023210.

Structurei

3D structure databases

ProteinModelPortaliQ9XS60.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini69 – 11244TNFR-CysInterPro annotationAdd
BLAST
Domaini113 – 15038TNFR-CysInterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410J23A. Eukaryota.
ENOG4112ADB. LUCA.
HOGENOMiHOG000139681.
KOiK04390.

Family and domain databases

InterProiIPR008063. Fas_rcpt.
IPR001368. TNFR/NGFR_Cys_rich_reg.
[Graphical view]
PANTHERiPTHR23097:SF114. PTHR23097:SF114. 1 hit.
PfamiPF00020. TNFR_c6. 1 hit.
[Graphical view]
PRINTSiPR01680. TNFACTORR6.
SMARTiSM00208. TNFR. 3 hits.
[Graphical view]
PROSITEiPS50050. TNFR_NGFR_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9XS60-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTGIWVLLPL ILTCIAGSLS TSINDCKIKN ETQYSTGYLS GNFCCQLCPP
60 70 80 90 100
GTKKKADCTS NEGKPDCEPC QEGEEYTDKS HFSSKCRRCS LCDGEHGLEV
110 120 130 140 150
ETDCTTIQNT KCRCKSNFFC NALKCEHCDP CTMCEHGIIE ECTQTSNTKC
160 170 180 190 200
KEKGSTTGSK HHFLWLLCIL LLIPIVLGLR RYKKHRDGKH GYDKSTALIP
210 220 230 240 250
VGVDRCISFK TNRENSRNHF TCFLLKFLYF FERQRNRERE RDRERERERE
260
RERERDCSYP LNL
Length:263
Mass (Da):30,375
Last modified:November 1, 1999 - v1
Checksum:i6D76782ADED1BFD7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB021297 mRNA. Translation: BAA78429.1.
RefSeqiNP_001075464.1. NM_001081995.1.
UniGeneiOcu.2354.

Genome annotation databases

GeneIDi100008609.
KEGGiocu:100008609.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB021297 mRNA. Translation: BAA78429.1.
RefSeqiNP_001075464.1. NM_001081995.1.
UniGeneiOcu.2354.

3D structure databases

ProteinModelPortaliQ9XS60.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9986.ENSOCUP00000023210.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi100008609.
KEGGiocu:100008609.

Organism-specific databases

CTDi355.

Phylogenomic databases

eggNOGiENOG410J23A. Eukaryota.
ENOG4112ADB. LUCA.
HOGENOMiHOG000139681.
KOiK04390.

Family and domain databases

InterProiIPR008063. Fas_rcpt.
IPR001368. TNFR/NGFR_Cys_rich_reg.
[Graphical view]
PANTHERiPTHR23097:SF114. PTHR23097:SF114. 1 hit.
PfamiPF00020. TNFR_c6. 1 hit.
[Graphical view]
PRINTSiPR01680. TNFACTORR6.
SMARTiSM00208. TNFR. 3 hits.
[Graphical view]
PROSITEiPS50050. TNFR_NGFR_2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ9XS60_RABIT
AccessioniPrimary (citable) accession number: Q9XS60
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1999
Last sequence update: November 1, 1999
Last modified: May 11, 2016
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.