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Q9XHY7

- HACL3_ORYSJ

UniProt

Q9XHY7 - HACL3_ORYSJ

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Protein

Probable histone acetyltransferase HAC-like 3

Gene

Os01g0246100

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

Acetyltransferase enzyme. Acetylates histones, giving a specific tag for transcriptional activation.By similarity

Catalytic activityi

Acetyl-CoA + [histone] = CoA + acetyl-[histone].By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei902 – 9021Acetyl-CoABy similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri621 – 68969PHD-typeAdd
BLAST
Zinc fingeri1012 – 105948ZZ-type 1PROSITE-ProRule annotationAdd
BLAST
Zinc fingeri1124 – 117148ZZ-type 2PROSITE-ProRule annotationAdd
BLAST
Zinc fingeri1177 – 126084TAZ-typePROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

  1. histone acetyltransferase activity Source: UniProtKB-EC
  2. transcription cofactor activity Source: EnsemblPlants/Gramene
  3. zinc ion binding Source: EnsemblPlants/Gramene

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: UniProtKB-KW
  2. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Activator, Acyltransferase, Chromatin regulator, Transferase

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Probable histone acetyltransferase HAC-like 3 (EC:2.3.1.48By similarity)
Gene namesi
Ordered Locus Names:Os01g0246100, LOC_Os01g14370
ORF Names:OSJNBa0004G10.16, OSJNBa0049B20.5
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 1

Organism-specific databases

GrameneiQ9XHY7.

Subcellular locationi

Nucleus Curated

GO - Cellular componenti

  1. nucleus Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 12761276Probable histone acetyltransferase HAC-like 3PRO_0000269747Add
BLAST

Proteomic databases

PRIDEiQ9XHY7.

Expressioni

Gene expression databases

ExpressionAtlasiQ9XHY7. baseline.

Structurei

3D structure databases

ProteinModelPortaliQ9XHY7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini704 – 1130427CBP/p300-type HATPROSITE-ProRule annotationAdd
BLAST

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni827 – 8293Acetyl-CoA bindingBy similarity
Regioni846 – 8472Acetyl-CoA bindingBy similarity

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili953 – 97321Sequence AnalysisAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi234 – 24714Ser-richAdd
BLAST
Compositional biasi1130 – 115728Cys-richAdd
BLAST

Sequence similaritiesi

Contains 1 CBP/p300-type HAT (histone acetyltransferase) domain.PROSITE-ProRule annotation
Contains 1 PHD-type zinc finger.Curated
Contains 1 TAZ-type zinc finger.PROSITE-ProRule annotation
Contains 2 ZZ-type zinc fingers.PROSITE-ProRule annotation

Zinc finger

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri621 – 68969PHD-typeAdd
BLAST
Zinc fingeri1012 – 105948ZZ-type 1PROSITE-ProRule annotationAdd
BLAST
Zinc fingeri1124 – 117148ZZ-type 2PROSITE-ProRule annotationAdd
BLAST
Zinc fingeri1177 – 126084TAZ-typePROSITE-ProRule annotationAdd
BLAST

Keywords - Domaini

Coiled coil, Repeat, Zinc-finger

Phylogenomic databases

eggNOGiNOG308586.
HOGENOMiHOG000082957.
InParanoidiQ9XHY7.
KOiK04498.

Family and domain databases

Gene3Di1.20.1020.10. 1 hit.
3.30.40.10. 1 hit.
InterProiIPR013178. Histone_H3-K56_AcTrfase_RTT109.
IPR019786. Zinc_finger_PHD-type_CS.
IPR011011. Znf_FYVE_PHD.
IPR001965. Znf_PHD.
IPR013083. Znf_RING/FYVE/PHD.
IPR000197. Znf_TAZ.
IPR000433. Znf_ZZ.
[Graphical view]
PfamiPF08214. KAT11. 1 hit.
PF02135. zf-TAZ. 1 hit.
[Graphical view]
SMARTiSM00249. PHD. 1 hit.
SM00291. ZnF_ZZ. 1 hit.
[Graphical view]
SUPFAMiSSF57903. SSF57903. 1 hit.
SSF57933. SSF57933. 1 hit.
PROSITEiPS51727. CBP_P300_HAT. 1 hit.
PS01359. ZF_PHD_1. 1 hit.
PS50134. ZF_TAZ. 1 hit.
PS01357. ZF_ZZ_1. 1 hit.
PS50135. ZF_ZZ_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9XHY7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MMAKTLQGTQ QQYAASGFPT QQYPTSGWTQ SAAEILQLDN MDQDTSVVRN
60 70 80 90 100
IIHRKIVEYL NERKEFCNFD LSFLMEIGKC IDRHLFEKAD SKIKYMDLET
110 120 130 140 150
LRTRLNAIVN SASFRGSMFH WSASAASSKL NSQQLPVMEV PIYHDRVTPG
160 170 180 190 200
PNNLPSCAYN VSSTQGYNQY ENCMGAANFA HSLADKPKQM PERLANTIFT
210 220 230 240 250
SCASTLPKCS PSIDVLHIGH IKEHFSGDAY QNDSSQPSTS GSSSSLSAVW
260 270 280 290 300
DQTTCSSAMR TLPMDSFSTV NGQNLSTNNK SLYPTTGQGP LLQQYIECEM
310 320 330 340 350
KQETWSRSLE QSDQSNITTG NRDLYHAQIH PYINGEHKRD RCIQMKEKLG
360 370 380 390 400
HTSDHEGFSR EKSSNLSNHF MHHQQGFMTN YGACSPVSKT VDRAEQTSNS
410 420 430 440 450
TVSKPTSPAS DGSSGKHYPA KRLKVDVPHL VHVNEMEASK EQQPAANETY
460 470 480 490 500
ASAETVQSEV TNSPTKSPCC TSLGDNIACT DNVHGMDMVR LSGSAVQTEE
510 520 530 540 550
EFRRENSDIE MKDAKVDLLD QTLSGDSLRA RKRRGASVLY ALTSEELKDH
560 570 580 590 600
LCTLNHDTSQ SKVPTEELLS VEGLPDQNTC NLCGMERLLF EPPPRFCALC
610 620 630 640 650
FKIINSTGSY YVEVENGNDK SSICGRCHHL SSAKAKYQKR FSYAETDAEA
660 670 680 690 700
EWWVQCDKCK AWQHQICALF NPKIVDPEAE YTCAKCFLKE KDNEDVDSLE
710 720 730 740 750
PSTILGAREL PRTRLSDHIE QRLSERLVQE RQQRAIASGK SVDEVPGVEG
760 770 780 790 800
LTVRVVSSAD RTLQVQPRFK DFFKKEQYPG EFPYKSKAIL LFQKNEGVDV
810 820 830 840 850
CLFAMYVQEY GSACPSPNQR HVYLAYIDSV KYFRPEIKSA SGEALRTFVY
860 870 880 890 900
HEILIGYLDF CKKRGFVSCS IWTCPSTKRD DYVLYCHPTI QKMPKSDKLR
910 920 930 940 950
SWYQNLVKKA VKEGVVVERN TLYDFFLQPT NECKTNISAA WLPYCDNDFW
960 970 980 990 1000
PGEAERLLEK KDDDTSQKKE TQLGRLLRVA KRDDRKGNLE DILLVHKLGE
1010 1020 1030 1040 1050
RLRTMKEDFL MLCLQQFCKH CHHPIVSGSS WVCTSCKNFF LCERCYAEEL
1060 1070 1080 1090 1100
NTPLKDRHPA TTKQKHAFER IEEEPLPETD DVDPTMESKY FDSRIDFLKH
1110 1120 1130 1140 1150
CQDNQYQFDT LRRAKHSTMM ILYHLHDSTC SSCHRAMDQC LAWRCLVCLG
1160 1170 1180 1190 1200
CNFCDSCYKQ DGESLHIHKL RQKKDHHVLQ KYTLQDYLEG LVHASRCFDR
1210 1220 1230 1240 1250
SCTSKLCLTL KKLFFHGVRC HTRARGGGGC HMCVFMWKLL FTHSLLCDNA
1260 1270
DCSAPRCRDI KAYIADRSMT DLSISG
Length:1,276
Mass (Da):145,098
Last modified:January 9, 2007 - v2
Checksum:i902E2A329079778E
GO

Sequence cautioni

The sequence BAE95818.1 differs from that shown. Reason: Erroneous initiation.
The sequence AAD38279.1 differs from that shown. Reason: Erroneous gene model prediction.

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti468 – 4681P → Q(PubMed:16100779)Curated

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC007789 Genomic DNA. Translation: AAD38279.1. Sequence problems.
AP003074 Genomic DNA. Translation: BAE95818.1. Different initiation.
AP008207 Genomic DNA. Translation: BAF04486.1.
AK120732 mRNA. No translation available.
RefSeqiNP_001042572.1. NM_001049107.1.
UniGeneiOs.15122.

Genome annotation databases

EnsemblPlantsiOS01T0246100-01; OS01T0246100-01; OS01G0246100.
GeneIDi4326755.
KEGGiosa:4326755.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC007789 Genomic DNA. Translation: AAD38279.1 . Sequence problems.
AP003074 Genomic DNA. Translation: BAE95818.1 . Different initiation.
AP008207 Genomic DNA. Translation: BAF04486.1 .
AK120732 mRNA. No translation available.
RefSeqi NP_001042572.1. NM_001049107.1.
UniGenei Os.15122.

3D structure databases

ProteinModelPortali Q9XHY7.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi Q9XHY7.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS01T0246100-01 ; OS01T0246100-01 ; OS01G0246100 .
GeneIDi 4326755.
KEGGi osa:4326755.

Organism-specific databases

Gramenei Q9XHY7.

Phylogenomic databases

eggNOGi NOG308586.
HOGENOMi HOG000082957.
InParanoidi Q9XHY7.
KOi K04498.

Gene expression databases

ExpressionAtlasi Q9XHY7. baseline.

Family and domain databases

Gene3Di 1.20.1020.10. 1 hit.
3.30.40.10. 1 hit.
InterProi IPR013178. Histone_H3-K56_AcTrfase_RTT109.
IPR019786. Zinc_finger_PHD-type_CS.
IPR011011. Znf_FYVE_PHD.
IPR001965. Znf_PHD.
IPR013083. Znf_RING/FYVE/PHD.
IPR000197. Znf_TAZ.
IPR000433. Znf_ZZ.
[Graphical view ]
Pfami PF08214. KAT11. 1 hit.
PF02135. zf-TAZ. 1 hit.
[Graphical view ]
SMARTi SM00249. PHD. 1 hit.
SM00291. ZnF_ZZ. 1 hit.
[Graphical view ]
SUPFAMi SSF57903. SSF57903. 1 hit.
SSF57933. SSF57933. 1 hit.
PROSITEi PS51727. CBP_P300_HAT. 1 hit.
PS01359. ZF_PHD_1. 1 hit.
PS50134. ZF_TAZ. 1 hit.
PS01357. ZF_ZZ_1. 1 hit.
PS50135. ZF_ZZ_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The genome sequence and structure of rice chromosome 1."
    Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.
    , Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S., Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H., Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S., Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y., Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S., Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H., Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.
    Nature 420:312-316(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  4. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.

Entry informationi

Entry nameiHACL3_ORYSJ
AccessioniPrimary (citable) accession number: Q9XHY7
Secondary accession number(s): Q0JP42, Q1EHS1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 9, 2007
Last sequence update: January 9, 2007
Last modified: October 29, 2014
This is version 85 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Caution

It is uncertain whether Met-1 or Met-2 is the initiator.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3