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Q9XHY7

- HACL3_ORYSJ

UniProt

Q9XHY7 - HACL3_ORYSJ

Protein

Probable histone acetyltransferase HAC-like 3

Gene

Os01g0246100

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 84 (01 Oct 2014)
      Sequence version 2 (09 Jan 2007)
      Previous versions | rss
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    Functioni

    Acetyltransferase enzyme. Acetylates histones, giving a specific tag for transcriptional activation By similarity.By similarity

    Catalytic activityi

    Acetyl-CoA + [histone] = CoA + acetyl-[histone].

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Zinc fingeri621 – 68969PHD-typeAdd
    BLAST
    Zinc fingeri1012 – 105948ZZ-type 1PROSITE-ProRule annotationAdd
    BLAST
    Zinc fingeri1124 – 117148ZZ-type 2PROSITE-ProRule annotationAdd
    BLAST
    Zinc fingeri1177 – 126084TAZ-typePROSITE-ProRule annotationAdd
    BLAST

    GO - Molecular functioni

    1. histone acetyltransferase activity Source: UniProtKB-EC
    2. transcription cofactor activity Source: InterPro
    3. zinc ion binding Source: InterPro

    GO - Biological processi

    1. regulation of transcription, DNA-templated Source: UniProtKB-KW
    2. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Molecular functioni

    Activator, Acyltransferase, Chromatin regulator, Transferase

    Keywords - Biological processi

    Transcription, Transcription regulation

    Keywords - Ligandi

    Metal-binding, Zinc

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable histone acetyltransferase HAC-like 3 (EC:2.3.1.48)
    Gene namesi
    Ordered Locus Names:Os01g0246100, LOC_Os01g14370
    ORF Names:OSJNBa0004G10.16, OSJNBa0049B20.5
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 1

    Organism-specific databases

    GrameneiQ9XHY7.

    Subcellular locationi

    Nucleus Curated

    GO - Cellular componenti

    1. nucleus Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Nucleus

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 12761276Probable histone acetyltransferase HAC-like 3PRO_0000269747Add
    BLAST

    Proteomic databases

    PRIDEiQ9XHY7.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9XHY7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Coiled coil

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Coiled coili953 – 97321Sequence AnalysisAdd
    BLAST

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi234 – 24714Ser-richAdd
    BLAST
    Compositional biasi1130 – 115728Cys-richAdd
    BLAST

    Sequence similaritiesi

    Contains 1 PHD-type zinc finger.Curated
    Contains 1 TAZ-type zinc finger.PROSITE-ProRule annotation
    Contains 2 ZZ-type zinc fingers.PROSITE-ProRule annotation

    Zinc finger

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Zinc fingeri621 – 68969PHD-typeAdd
    BLAST
    Zinc fingeri1012 – 105948ZZ-type 1PROSITE-ProRule annotationAdd
    BLAST
    Zinc fingeri1124 – 117148ZZ-type 2PROSITE-ProRule annotationAdd
    BLAST
    Zinc fingeri1177 – 126084TAZ-typePROSITE-ProRule annotationAdd
    BLAST

    Keywords - Domaini

    Coiled coil, Repeat, Zinc-finger

    Phylogenomic databases

    eggNOGiNOG308586.
    HOGENOMiHOG000082957.
    KOiK04498.

    Family and domain databases

    Gene3Di1.20.1020.10. 1 hit.
    3.30.40.10. 1 hit.
    InterProiIPR013178. Histone_H3-K56_AcTrfase_RTT109.
    IPR019786. Zinc_finger_PHD-type_CS.
    IPR011011. Znf_FYVE_PHD.
    IPR001965. Znf_PHD.
    IPR013083. Znf_RING/FYVE/PHD.
    IPR000197. Znf_TAZ.
    IPR000433. Znf_ZZ.
    [Graphical view]
    PfamiPF08214. KAT11. 1 hit.
    PF02135. zf-TAZ. 1 hit.
    [Graphical view]
    SMARTiSM00249. PHD. 1 hit.
    SM00291. ZnF_ZZ. 1 hit.
    [Graphical view]
    SUPFAMiSSF57903. SSF57903. 1 hit.
    SSF57933. SSF57933. 1 hit.
    PROSITEiPS01359. ZF_PHD_1. 1 hit.
    PS50134. ZF_TAZ. 1 hit.
    PS01357. ZF_ZZ_1. 1 hit.
    PS50135. ZF_ZZ_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q9XHY7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MMAKTLQGTQ QQYAASGFPT QQYPTSGWTQ SAAEILQLDN MDQDTSVVRN     50
    IIHRKIVEYL NERKEFCNFD LSFLMEIGKC IDRHLFEKAD SKIKYMDLET 100
    LRTRLNAIVN SASFRGSMFH WSASAASSKL NSQQLPVMEV PIYHDRVTPG 150
    PNNLPSCAYN VSSTQGYNQY ENCMGAANFA HSLADKPKQM PERLANTIFT 200
    SCASTLPKCS PSIDVLHIGH IKEHFSGDAY QNDSSQPSTS GSSSSLSAVW 250
    DQTTCSSAMR TLPMDSFSTV NGQNLSTNNK SLYPTTGQGP LLQQYIECEM 300
    KQETWSRSLE QSDQSNITTG NRDLYHAQIH PYINGEHKRD RCIQMKEKLG 350
    HTSDHEGFSR EKSSNLSNHF MHHQQGFMTN YGACSPVSKT VDRAEQTSNS 400
    TVSKPTSPAS DGSSGKHYPA KRLKVDVPHL VHVNEMEASK EQQPAANETY 450
    ASAETVQSEV TNSPTKSPCC TSLGDNIACT DNVHGMDMVR LSGSAVQTEE 500
    EFRRENSDIE MKDAKVDLLD QTLSGDSLRA RKRRGASVLY ALTSEELKDH 550
    LCTLNHDTSQ SKVPTEELLS VEGLPDQNTC NLCGMERLLF EPPPRFCALC 600
    FKIINSTGSY YVEVENGNDK SSICGRCHHL SSAKAKYQKR FSYAETDAEA 650
    EWWVQCDKCK AWQHQICALF NPKIVDPEAE YTCAKCFLKE KDNEDVDSLE 700
    PSTILGAREL PRTRLSDHIE QRLSERLVQE RQQRAIASGK SVDEVPGVEG 750
    LTVRVVSSAD RTLQVQPRFK DFFKKEQYPG EFPYKSKAIL LFQKNEGVDV 800
    CLFAMYVQEY GSACPSPNQR HVYLAYIDSV KYFRPEIKSA SGEALRTFVY 850
    HEILIGYLDF CKKRGFVSCS IWTCPSTKRD DYVLYCHPTI QKMPKSDKLR 900
    SWYQNLVKKA VKEGVVVERN TLYDFFLQPT NECKTNISAA WLPYCDNDFW 950
    PGEAERLLEK KDDDTSQKKE TQLGRLLRVA KRDDRKGNLE DILLVHKLGE 1000
    RLRTMKEDFL MLCLQQFCKH CHHPIVSGSS WVCTSCKNFF LCERCYAEEL 1050
    NTPLKDRHPA TTKQKHAFER IEEEPLPETD DVDPTMESKY FDSRIDFLKH 1100
    CQDNQYQFDT LRRAKHSTMM ILYHLHDSTC SSCHRAMDQC LAWRCLVCLG 1150
    CNFCDSCYKQ DGESLHIHKL RQKKDHHVLQ KYTLQDYLEG LVHASRCFDR 1200
    SCTSKLCLTL KKLFFHGVRC HTRARGGGGC HMCVFMWKLL FTHSLLCDNA 1250
    DCSAPRCRDI KAYIADRSMT DLSISG 1276
    Length:1,276
    Mass (Da):145,098
    Last modified:January 9, 2007 - v2
    Checksum:i902E2A329079778E
    GO

    Sequence cautioni

    The sequence BAE95818.1 differs from that shown. Reason: Erroneous initiation.
    The sequence AAD38279.1 differs from that shown. Reason: Erroneous gene model prediction.

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti468 – 4681P → Q(PubMed:16100779)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC007789 Genomic DNA. Translation: AAD38279.1. Sequence problems.
    AP003074 Genomic DNA. Translation: BAE95818.1. Different initiation.
    AP008207 Genomic DNA. Translation: BAF04486.1.
    AK120732 mRNA. No translation available.
    RefSeqiNP_001042572.1. NM_001049107.1.
    UniGeneiOs.15122.

    Genome annotation databases

    EnsemblPlantsiOS01T0246100-01; OS01T0246100-01; OS01G0246100.
    GeneIDi4326755.
    KEGGiosa:4326755.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC007789 Genomic DNA. Translation: AAD38279.1 . Sequence problems.
    AP003074 Genomic DNA. Translation: BAE95818.1 . Different initiation.
    AP008207 Genomic DNA. Translation: BAF04486.1 .
    AK120732 mRNA. No translation available.
    RefSeqi NP_001042572.1. NM_001049107.1.
    UniGenei Os.15122.

    3D structure databases

    ProteinModelPortali Q9XHY7.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi Q9XHY7.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS01T0246100-01 ; OS01T0246100-01 ; OS01G0246100 .
    GeneIDi 4326755.
    KEGGi osa:4326755.

    Organism-specific databases

    Gramenei Q9XHY7.

    Phylogenomic databases

    eggNOGi NOG308586.
    HOGENOMi HOG000082957.
    KOi K04498.

    Family and domain databases

    Gene3Di 1.20.1020.10. 1 hit.
    3.30.40.10. 1 hit.
    InterProi IPR013178. Histone_H3-K56_AcTrfase_RTT109.
    IPR019786. Zinc_finger_PHD-type_CS.
    IPR011011. Znf_FYVE_PHD.
    IPR001965. Znf_PHD.
    IPR013083. Znf_RING/FYVE/PHD.
    IPR000197. Znf_TAZ.
    IPR000433. Znf_ZZ.
    [Graphical view ]
    Pfami PF08214. KAT11. 1 hit.
    PF02135. zf-TAZ. 1 hit.
    [Graphical view ]
    SMARTi SM00249. PHD. 1 hit.
    SM00291. ZnF_ZZ. 1 hit.
    [Graphical view ]
    SUPFAMi SSF57903. SSF57903. 1 hit.
    SSF57933. SSF57933. 1 hit.
    PROSITEi PS01359. ZF_PHD_1. 1 hit.
    PS50134. ZF_TAZ. 1 hit.
    PS01357. ZF_ZZ_1. 1 hit.
    PS50135. ZF_ZZ_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence and structure of rice chromosome 1."
      Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.
      , Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S., Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H., Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S., Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y., Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S., Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H., Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.
      Nature 420:312-316(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    3. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    4. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Nipponbare.

    Entry informationi

    Entry nameiHACL3_ORYSJ
    AccessioniPrimary (citable) accession number: Q9XHY7
    Secondary accession number(s): Q0JP42, Q1EHS1
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 9, 2007
    Last sequence update: January 9, 2007
    Last modified: October 1, 2014
    This is version 84 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Caution

    It is uncertain whether Met-1 or Met-2 is the initiator.Curated

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3