Q9XDV5 (Q9XDV5_CLOSR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Xylanase C EMBL BAA82143.1
EC=3.2.1.8 EMBL BAA82143.1

Gene names

Name:

xynC EMBL BAA82143.1

Organism

Clostridium stercorarium EMBL BAA82143.1

Taxonomic identifier

1510 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	1031 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 10 (cellulase F) family. RuleBase RU003432

Ontologies

Keywords
Biological process	Xylan degradation EMBL BAA82143.1
Molecular function	Glycosidase RuleBase RU003432 EMBL BAA82143.1 Hydrolase
Gene Ontology (GO)
Biological process	carbohydrate catabolic process Inferred from electronic annotation. Source: InterPro xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro endo-1,4-beta-xylanase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9XDV5 [UniParc]. Last modified November 1, 1999. Version 1. Checksum: 778639BE2ECF286A	FASTA	1,031	115,324
	10 20 30 40 50 60 MNGRNGGKRP IASLLVLTLA FLFIPVTKAE TTVYHETFAE GKGAAVQSGG ATITHVTGKF 70 80 90 100 110 120 FDGNGDGAAL YISNRVNNWD AADFRFSDIG LQDGRIYKIT VKGYVDPDVH VPEGSQIWLQ 130 140 150 160 170 180 TVNSYGWWGS TDIKAGEAFT LTGVYKVDTT NDYALRIQSN DTGAFVPFYI GEILITEETV 190 200 210 220 230 240 PQDDSRNGNK THAEKFTPIT FEDQTTGGFT GRAGTEILTV TDEANHTDGG RYSLKVGGRN 250 260 270 280 290 300 DTWHGPALRV EKYVDQGYEY KVAVYVRLIS PESAQLQLST QIGEGTSASY VNLAKKNVAI 310 320 330 340 350 360 SDGWVLLEGT YRYDNLGGGY LTIYVESPDS PEASFYIDDI NFEPTGMKSE EIEKGLKSLK 370 380 390 400 410 420 DVYKDNFLTG TAISLRDLEG VRFELLKKHF NAVTAENAMK PSELQREKGN FTFDGADRLV 430 440 450 460 470 480 NAAISAGMKV HGHTLVWHQQ TPAWMNIKLD SGGNIVYLSR EEALGNMRNH IRTVIEHFGD 490 500 510 520 530 540 KVISWDVVNE AMSDNPSNPS DWRGSLRKSP WYYAIGEDYV EQAFLAAREV LDEHPEWDIK 550 560 570 580 590 600 LYYNDYNLDN QNKALAVYNM VRELNEKYQK THPGKLLIDG IGMQGHYSVN TNPKNVELSL 610 620 630 640 650 660 KRFTELGVEV SISELDIRAG SNYQLTEKEA NAQAYLYAQL FKIFREYSDS IARVTFWGMD 670 680 690 700 710 720 DGTSWRAEES PLLFDRTLKA KPAYYAVADP DEFIEKYKPE TIEANRAYAV YGTPEIDGKT 730 740 750 760 770 780 DEVWNKAPEL KINRYQTAWH GADGTARVLY DENNLYVLIK VNDTQLDKGS PNPWEQDSVE 790 800 810 820 830 840 IFIDENNAKT SFYEGDDGQY RVNFENETSF NPESIAGGFE SAAEVSGQLY LGSENTVQDR 850 860 870 880 890 900 EPVSNMQIGF DVQINDGKNG VRQSIATWND PTGNAWQDTS VFGILTLKSK NPVTRGEAIV 910 920 930 940 950 960 KIMKAYDMEP LENWNDNSPD ASGSYAGYYA RAKETGFVSG IGDNKIGAEI PLTREMFFTM 970 980 990 1000 1010 1020 IYNIERITGK MQGIDISDAE LTLFSDYNDL SEWAEEAVKA LVKSGRIKIN GDLLPKALMD 1030 AEEVEAFLRL R

References

[1]	"Cloning, sequencing, and expression of the gene encoding the Clostridium stercorarium xylanase C in Escherichia coli." Ali M.K., Fukumura M., Sakano K., Karita S., Kimura T., Sakka K., Ohmiya K. Biosci. Biotechnol. Biochem. 63:1596-1604(1999) [PubMed: 10540748] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AB024743 Genomic DNA. Translation: BAA82143.1.
3D structure databases
HSSP	HSSP built from PDB template 1I8A based on UniProtKB Q60037.
ProteinModelPortal	Q9XDV5.
ModBase	Search...
Protein family/group databases
CAZy	CBM22. Carbohydrate-Binding Module Family 22. CBM9. Carbohydrate-Binding Module Family 9. GH10. Glycoside Hydrolase Family 10.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
InterPro	IPR010502. Carb-bd_dom_fam9. IPR008960. Carb-bd_dom_fam9-like. IPR015922. Carb-bd_dom_fam9-like_subgr. IPR003305. CenC_carb-bd. IPR008979. Galactose-bd-like. IPR001000. Glyco_hydro_10. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR001119. S-layer_homology_dom. [Graphical view]
Gene3D	G3DSA:2.60.40.1190. CBD9. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
Pfam	PF02018. CBM_4_9. 1 hit. PF06452. DUF1083. 1 hit. PF00331. Glyco_hydro_10. 1 hit. [Graphical view]
PRINTS	PR00134. GLHYDRLASE10.
SMART	SM00633. Glyco_10. 1 hit. [Graphical view]
SUPFAM	SSF49344. CBD9-like. 1 hit. SSF49785. Gal_bind_like. 2 hits. SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00591. GLYCOSYL_HYDROL_F10. 1 hit. PS51272. SLH. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9XDV5_CLOSR

Accession

Primary (citable) accession number: Q9XDV5

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1999
Last sequence update:	November 1, 1999
Last modified:	October 19, 2011
This is version 58 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)