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Protein

Biotinylated protein TB7.3 homolog

Gene

MSMEG_1917

Organism
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Keywords - Ligandi

Biotin

Enzyme and pathway databases

BioCyciMSME246196:GJ4Y-1917-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Biotinylated protein TB7.3 homolog
Gene namesi
Ordered Locus Names:MSMEG_1917, MSMEI_1876
OrganismiMycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
Taxonomic identifieri246196 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacterium
Proteomesi
  • UP000006158 Componenti: Chromosome
  • UP000000757 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methionineiRemovedBy similarity
Chaini2 – 7170Biotinylated protein TB7.3 homologPRO_0000146837Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei37 – 371N6-biotinyllysinePROSITE-ProRule annotationBy similarity

Interactioni

Protein-protein interaction databases

STRINGi246196.MSMEG_1917.

Structurei

3D structure databases

ProteinModelPortaliQ9XCD6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini2 – 7170Biotinyl-bindingPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 biotinyl-binding domain.PROSITE-ProRule annotationCurated

Phylogenomic databases

eggNOGiENOG4106063. Bacteria.
COG0511. LUCA.
HOGENOMiHOG000020245.
OrthoDBiEOG610413.

Family and domain databases

InterProiIPR000089. Biotin_lipoyl.
IPR011053. Single_hybrid_motif.
[Graphical view]
PfamiPF00364. Biotin_lipoyl. 1 hit.
[Graphical view]
SUPFAMiSSF51230. SSF51230. 1 hit.
PROSITEiPS50968. BIOTINYL_LIPOYL. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9XCD6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEDVRAEIV ASVLEVVVHE GDQIGEGDTL VLLESMKMEI PVLAEVAGTV
60 70
TKVNVAEGDV IQAGHLIAVI D
Length:71
Mass (Da):7,438
Last modified:January 23, 2007 - v3
Checksum:i0E034F0263C7165E
GO

Sequence cautioni

The sequence ABK75917.1 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF144091 Genomic DNA. Translation: AAD41812.1.
CP000480 Genomic DNA. Translation: ABK75917.1. Different initiation.
CP001663 Genomic DNA. Translation: AFP38348.1.
RefSeqiWP_003893298.1. NC_008596.1.
WP_014877243.1. NZ_CP009494.1.
YP_886283.1. NC_008596.1.

Genome annotation databases

EnsemblBacteriaiABK75917; ABK75917; MSMEG_1917.
AFP38348; AFP38348; MSMEI_1876.
GeneIDi4537339.
KEGGimsb:LJ00_09570.
msg:MSMEI_1876.
msm:MSMEG_1917.
PATRICi18076283. VBIMycSme59918_1898.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF144091 Genomic DNA. Translation: AAD41812.1.
CP000480 Genomic DNA. Translation: ABK75917.1. Different initiation.
CP001663 Genomic DNA. Translation: AFP38348.1.
RefSeqiWP_003893298.1. NC_008596.1.
WP_014877243.1. NZ_CP009494.1.
YP_886283.1. NC_008596.1.

3D structure databases

ProteinModelPortaliQ9XCD6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi246196.MSMEG_1917.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABK75917; ABK75917; MSMEG_1917.
AFP38348; AFP38348; MSMEI_1876.
GeneIDi4537339.
KEGGimsb:LJ00_09570.
msg:MSMEI_1876.
msm:MSMEG_1917.
PATRICi18076283. VBIMycSme59918_1898.

Phylogenomic databases

eggNOGiENOG4106063. Bacteria.
COG0511. LUCA.
HOGENOMiHOG000020245.
OrthoDBiEOG610413.

Enzyme and pathway databases

BioCyciMSME246196:GJ4Y-1917-MONOMER.

Family and domain databases

InterProiIPR000089. Biotin_lipoyl.
IPR011053. Single_hybrid_motif.
[Graphical view]
PfamiPF00364. Biotin_lipoyl. 1 hit.
[Graphical view]
SUPFAMiSSF51230. SSF51230. 1 hit.
PROSITEiPS50968. BIOTINYL_LIPOYL. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "A mycobacterial extracytoplasmic sigma factor involved in survival following heat shock and oxidative stress."
    Fernandes N.D., Wu Q.-L., Kong D., Puyang X., Garg S., Husson R.N.
    J. Bacteriol. 181:4266-4274(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. Fleischmann R.D., Dodson R.J., Haft D.H., Merkel J.S., Nelson W.C., Fraser C.M.
    Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700084 / mc(2)155.
  3. "Interrupted coding sequences in Mycobacterium smegmatis: authentic mutations or sequencing errors?"
    Deshayes C., Perrodou E., Gallien S., Euphrasie D., Schaeffer C., Van-Dorsselaer A., Poch O., Lecompte O., Reyrat J.-M.
    Genome Biol. 8:R20.1-R20.9(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700084 / mc(2)155.
  4. "Ortho-proteogenomics: multiple proteomes investigation through orthology and a new MS-based protocol."
    Gallien S., Perrodou E., Carapito C., Deshayes C., Reyrat J.-M., Van Dorsselaer A., Poch O., Schaeffer C., Lecompte O.
    Genome Res. 19:128-135(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700084 / mc(2)155.

Entry informationi

Entry nameiBTB7_MYCS2
AccessioniPrimary (citable) accession number: Q9XCD6
Secondary accession number(s): A0QTP5, I7FHR8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 20, 2001
Last sequence update: January 23, 2007
Last modified: May 11, 2016
This is version 77 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.