Reviewed, UniProtKB/Swiss-Prot Q9XBL6 (NDHJ_ANAVT)

Names and origin

Protein names

Recommended name:
    NAD(P)H-quinone oxidoreductase subunit J
    EC=1.6.5.-
Alternative name(s):
    NAD(P)H dehydrogenase subunit J
    NADH-plastoquinone oxidoreductase subunit J
    NDH-1 subunit J
      Short name=NDH-J

Gene names

Name:	ndhJ
Ordered Locus Names:	Ava_1860

Organism

Anabaena variabilis (strain ATCC 29413 / PCC 7937) [Complete proteome] [HAMAP]

Taxonomic identifier

240292 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Nostocales › Nostocaceae › Anabaena

Protein attributes

Sequence length	175 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration By similarity.
Catalytic activity	NAD(P)H + plastoquinone = NAD(P)+ + plastoquinol. HAMAP MF_01357
Subunit structure	NDH-1 can be composed of about 15 different subunits; different subcomplexes with different compositions have been identified which probably have different functions By similarity.
Subcellular location	Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side By similarity.
Sequence similarities	Belongs to the complex I 30 kDa subunit family.

Ontologies

Keywords
Biological process	Transport
Cellular component	Membrane Thylakoid
Ligand	NAD NADP Plastoquinone
Molecular function	Oxidoreductase
PTM	Quinone
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	oxidation reduction Inferred from electronic annotation. Source: HAMAP photosynthesis, light reaction Inferred from electronic annotation. Source: HAMAP transport Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	thylakoid membrane Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	NADH dehydrogenase (ubiquinone) activity Inferred from electronic annotation. Source: InterPro quinone binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 175	175	NAD(P)H-quinone oxidoreductase subunit J HAMAP MF_01357		PRO_0000118666
Experimental info
	Sequence conflict	49	1	E → D in CAB45648. Ref.1
	Sequence conflict	72 – 73	2	GG → RR in CAB45648. Ref.1
	Sequence conflict	77	1	G → R in CAB45648. Ref.1
	Sequence conflict	101	1	V → I in CAB45648. Ref.1
	Sequence conflict	121	1	W → G in CAB45648. Ref.1
	Sequence conflict	130	1	E → G in CAB45648. Ref.1
	Sequence conflict	135	1	F → V in CAB45648. Ref.1
	Sequence conflict	150	1	M → I in CAB45648. Ref.1

Sequences

	Sequence		Length	Mass (Da)
	Q9XBL6-1 [UniParc]. Last modified April 4, 2006. Version 4. Checksum: 7543107ACCF6C46F	FASTA	175	19,920
	10 20 30 40 50 60 MADEELKPVP AAAEAIVPSG PTSQWLTENG FAHESLAADK NGVEIIKVEP DFLLPIATAL 70 80 90 100 110 120 YAYGFNYLQF QGGIDLGPGQ DLVSVYHLVK VSDNADKPEE VRVKVFLPRE NPVVPSVYWI 130 140 150 160 170 WKTADWQERE SYDMFGIIYE GHPNLKRILM PEDWVGWPLR KDYISPDFYE LQDAY

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Isolation and characterisation of the ndhCKJ gene-cluster of Anabaena variabilis." Happe T., Schiefer W., Boehme H. Submitted (OCT-1998) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]	"Complete sequence of Anabaena variabilis ATCC 29413." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Saunders E.H., Schmutz J., Larimer F., Land M., Kyrpides N., Mavrommatis K., Richardson P. Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	AJ012181 Genomic DNA. Translation: CAB45648.1. CP000117 Genomic DNA. Translation: ABA21482.1.
RefSeq	YP_322377.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	3681812.
GenomeReviews	Gene locus Ava_1860 in contig CP000117_GR.
KEGG	ava:Ava_1860.
NMPDR	fig|240292.3.peg.2940.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q9XBL6.
OMA	Q9XBL6. YELQDAY.
Enzyme and pathway databases
BioCyc	AVAR240292:AVA_1860-MON.
Family and domain databases
HAMAP	MF_01357. [Tree]
InterPro	IPR001268. NADH_UbQ_OxRdtase_30kDa_su. [Graphical view]
Pfam	PF00329. Complex1_30kDa. 1 hit. [Graphical view]
ProDom	PD001581. Complex1_30K. 1 hit. [Graphical view] [Entries sharing at least one domain]
PROSITE	PS00542. COMPLEX1_30K. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

NDHJ_ANAVT

Accession

Primary (citable) accession number: Q9XBL6
Secondary accession number(s): Q3MC04

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 27, 2001
Last sequence update:	April 4, 2006
Last modified:	June 16, 2009
This is version 48 of the entry and version 4 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)