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Protein

Putative membrane protein SCO0839

Gene

SCO0839

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Putative membrane protein SCO0839
Gene namesi
Ordered Locus Names:SCO0839
ORF Names:SCF43A.29c
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei16 – 36HelicalSequence analysisAdd BLAST21
Transmembranei177 – 197HelicalSequence analysisAdd BLAST21
Transmembranei202 – 222HelicalSequence analysisAdd BLAST21
Transmembranei237 – 257HelicalSequence analysisAdd BLAST21
Transmembranei281 – 301HelicalSequence analysisAdd BLAST21
Transmembranei316 – 336HelicalSequence analysisAdd BLAST21
Transmembranei373 – 393HelicalSequence analysisAdd BLAST21
Transmembranei529 – 549HelicalSequence analysisAdd BLAST21
Transmembranei554 – 574HelicalSequence analysisAdd BLAST21
Transmembranei587 – 607HelicalSequence analysisAdd BLAST21
Transmembranei627 – 647HelicalSequence analysisAdd BLAST21
Transmembranei648 – 668HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001035841 – 705Putative membrane protein SCO0839Add BLAST705

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO0839.

Structurei

3D structure databases

ProteinModelPortaliQ9XA86.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG2409. LUCA.
HOGENOMiHOG000072128.
InParanoidiQ9XA86.
KOiK06994.
OMAiGPYFGKV.
OrthoDBiPOG091H09ZB.
PhylomeDBiQ9XA86.

Family and domain databases

InterProiIPR004869. MMPL_dom.
IPR000731. SSD.
[Graphical view]
PfamiPF03176. MMPL. 2 hits.
[Graphical view]
PROSITEiPS50156. SSD. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9XA86-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTPSRPFRS PRRARWLVPV LLLLVWLVVG GALGPYAGKL GEVATNDQAS
60 70 80 90 100
FLPRSAESTR VVDAQQAFQQ DETLPVIVVW TADGDGDAAV TAHQQAATRS
110 120 130 140 150
VAGLEGDPGI VGPASPALPS DDGRALQAVV QVEPDLGERL PDVLADIGDA
160 170 180 190 200
AGQVPGTRAQ LAGPAASQAD LSDAFAGIDG LLLAVALITV LVILLLVYRS
210 220 230 240 250
VLLPLVIILS AVFALALSCA IVYALADRDV VRVDGQVQGI LSILVIGAAT
260 270 280 290 300
DYALLLTARF REELARHPDR FGAVRAALRD SWGAVVASAA TVALGLLALL
310 320 330 340 350
LSDLTNNRAL GPVGAIGIVC SVLSTLTFLP AVLVLLGRAA YWPAKPVRTG
360 370 380 390 400
DPEAGHRLWH RVAALVDRAP RRIWALSLAA LLACAAFAPT LSSKGVPLDE
410 420 430 440 450
IFVNDTPSVA AQQTLAEHFP GGSGNPAVVI AEADRLDPVL RAARDTRGVA
460 470 480 490 500
SAAPVTDSGR PGAGTPLVVD GRVRIDATLE APADSDAAKS TVVRLRAAVH
510 520 530 540 550
EVSGADALVG GYTAQQYDTQ ETAAEDRTLI VPVVLAIILV ILILLLRSLL
560 570 580 590 600
MPVLLVATVA LNFLATLGVS ALVFTHVFGF SGTDASVPLY GFVFLVALGV
610 620 630 640 650
DYNIFLMSRV REEALRHGVR EGILRGLTAT GGVITSAGVV LAATFAALGV
660 670 680 690 700
IPLAFLLQIA FIVAFGVLLD TLVVRSLLVP ALARDIGAVA WWPGRLGHRT

PAGRD
Length:705
Mass (Da):73,317
Last modified:November 1, 1999 - v1
Checksum:iDF4C3B77AE2EA2C4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939106 Genomic DNA. Translation: CAB48916.1.
PIRiT36452.
RefSeqiNP_625139.1. NC_003888.3.
WP_011027382.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAB48916; CAB48916; CAB48916.
GeneIDi1096262.
KEGGisco:SCO0839.
PATRICi23731218. VBIStrCoe124346_0831.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939106 Genomic DNA. Translation: CAB48916.1.
PIRiT36452.
RefSeqiNP_625139.1. NC_003888.3.
WP_011027382.1. NC_003888.3.

3D structure databases

ProteinModelPortaliQ9XA86.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO0839.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB48916; CAB48916; CAB48916.
GeneIDi1096262.
KEGGisco:SCO0839.
PATRICi23731218. VBIStrCoe124346_0831.

Phylogenomic databases

eggNOGiCOG2409. LUCA.
HOGENOMiHOG000072128.
InParanoidiQ9XA86.
KOiK06994.
OMAiGPYFGKV.
OrthoDBiPOG091H09ZB.
PhylomeDBiQ9XA86.

Family and domain databases

InterProiIPR004869. MMPL_dom.
IPR000731. SSD.
[Graphical view]
PfamiPF03176. MMPL. 2 hits.
[Graphical view]
PROSITEiPS50156. SSD. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiMMPLD_STRCO
AccessioniPrimary (citable) accession number: Q9XA86
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: November 1, 1999
Last modified: September 7, 2016
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.