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Protein
Submitted name:

Putative transcriptional regulator

Gene

SCO3833

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative transcriptional regulatorImported
Gene namesi
Ordered Locus Names:SCO3833Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PRIDEiQ9XA31.

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO3833.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2IAIX-ray1.65A1-209[»]
ProteinModelPortaliQ9XA31.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9XA31.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini8 – 6861HTH tetR-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 HTH tetR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108S4B. Bacteria.
ENOG4111GSE. LUCA.
HOGENOMiHOG000249907.
InParanoidiQ9XA31.
OMAiYGYDATS.
OrthoDBiPOG091H02BD.
PhylomeDBiQ9XA31.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
1.10.357.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS50977. HTH_TETR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9XA31-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTAKRDTYT PETLLSVAVQ VFIERGYDGT SMEHLSKAAG ISKSSIYHHV
60 70 80 90 100
TGKEELLRRA VSRALDELFG ILDEEHARVG TAAERLEYVV RRMVEVLMAE
110 120 130 140 150
LPYVTLLLRV RGNTGTERWA LERRREFDHR VAALLKDAAA EGDVRADVEV
160 170 180 190 200
RLATRLVFGM INSIVEWYRP EGPDGRSDAS GASGVSGAGE REVVDAVARL

VFGGLRKAS
Length:209
Mass (Da):23,100
Last modified:November 1, 1999 - v1
Checksum:i417A8BDDC37B7AFC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939117 Genomic DNA. Translation: CAB45200.1.
PIRiT36702.
RefSeqiNP_628021.1. NC_003888.3.
WP_003975101.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAB45200; CAB45200; CAB45200.
GeneIDi1099269.
KEGGisco:SCO3833.
PATRICi23737436. VBIStrCoe124346_3902.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939117 Genomic DNA. Translation: CAB45200.1.
PIRiT36702.
RefSeqiNP_628021.1. NC_003888.3.
WP_003975101.1. NC_003888.3.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2IAIX-ray1.65A1-209[»]
ProteinModelPortaliQ9XA31.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO3833.

Proteomic databases

PRIDEiQ9XA31.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB45200; CAB45200; CAB45200.
GeneIDi1099269.
KEGGisco:SCO3833.
PATRICi23737436. VBIStrCoe124346_3902.

Phylogenomic databases

eggNOGiENOG4108S4B. Bacteria.
ENOG4111GSE. LUCA.
HOGENOMiHOG000249907.
InParanoidiQ9XA31.
OMAiYGYDATS.
OrthoDBiPOG091H02BD.
PhylomeDBiQ9XA31.

Miscellaneous databases

EvolutionaryTraceiQ9XA31.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
1.10.357.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS50977. HTH_TETR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ9XA31_STRCO
AccessioniPrimary (citable) accession number: Q9XA31
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1999
Last sequence update: November 1, 1999
Last modified: September 7, 2016
This is version 97 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.