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Q9X592 (Q9X592_AZOIR) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:pelA EMBL AAD25394.1
OrganismAzospirillum irakense EMBL AAD25394.1
Taxonomic identifier34011 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesRhodospirillaceaeAzospirillum

Protein attributes

Sequence length432 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Molecular functionLyase EMBL AAD25394.1
   Technical term3D-structure PDB 1R76
Gene Ontology (GO)
   Molecular_functionlyase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site3071Proton donor/acceptor PDB 1R76
Binding site1721Substrate PDB 1R76

Sequences

Sequence LengthMass (Da)Tools
Q9X592 [UniParc].

Last modified November 1, 1999. Version 1.
Checksum: A9E0F8D7ED0F2490

FASTA43247,007
        10         20         30         40         50         60 
MKRIALLIPL FASNLLIPAT VASAAVIGMN EAASALTPSR VSSLPDTQRA AWQEYLARSE 

        70         80         90        100        110        120 
AQLSRDKASL AAELAPGQPL PPPPAEGKGA DTMPLDKPAA WYTSKAARHV ADVIVSFQTP 

       130        140        150        160        170        180 
AGGWGKNQPR DGALRLPGQH YTGENVAKVK SGSNDLDAAR DRDWHYVGTI DNDATVTEIR 

       190        200        210        220        230        240 
FLAQVVSQLA PEEAAPYRDA ALKGIEYLLA SQFPNGGWPQ VWPLEGGYHD AITYNDDALV 

       250        260        270        280        290        300 
HVAELLSDIA AGRDGFGFVP PAIRTRALEA TNAAIHCIVE TQVVQDGKRL GWGQQHDALT 

       310        320        330        340        350        360 
LRPTSARNFE PAALSSTESA RILLFLMEIE APSDAVKQAI RGGVAWLNTS VIRDRAWVKS 

       370        380        390        400        410        420 
DQGYQLVTEQ GAKPLWSRFY SLDGNKPVFG DRDKTIHDDV MGISQERRTG YAWYTTSPQK 

       430 
ALSAFTKWEK RS 

« Hide

References

[1]"Azospirillum irakense produces a novel type of pectate lyase."
Bekri M.A., Desair J., Keijers V., Proost P., Searle-van Leeuwen M., Vanderleyden J., Vande Broek A.
J. Bacteriol. 181:2440-2447(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: KBC1 EMBL AAD25394.1.
[2]"Azospirillum irakense pectate lyase displays a toroidal fold."
Novoa De Armas H., Verboven C., De Ranter C., Desair J., Vande Broek A., Vanderleyden J., Rabijns A.
Acta Crystallogr. D 60:999-1007(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.65 ANGSTROMS) OF 25-432, ACTIVE SITE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF121904 Genomic DNA. Translation: AAD25394.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1R76X-ray2.65A25-432[»]
ProteinModelPortalQ9X592.
SMRQ9X592. Positions 25-432.
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

CAZyPL10. Polysaccharide Lyase Family 10.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D1.50.10.20. 1 hit.
InterProIPR012669. Pectate_lyase.
IPR008930. Terpenoid_cyclase/PrenylTrfase.
[Graphical view]
PfamPF09492. Pec_lyase. 1 hit.
[Graphical view]
TIGRFAMsTIGR02474. pec_lyase. 1 hit.
ProtoNetSearch...

Other

EvolutionaryTraceQ9X592.

Entry information

Entry nameQ9X592_AZOIR
AccessionPrimary (citable) accession number: Q9X592
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1999
Last sequence update: November 1, 1999
Last modified: June 11, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)