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Protein

Beta-xylanase

Gene

xyl30

Organism
Streptomyces avermitilis
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Polysaccharide degradation, Xylan degradationImported

Enzyme and pathway databases

BRENDAi3.2.1.8. 5980.

Protein family/group databases

CAZyiCBM13. Carbohydrate-Binding Module Family 13.
GH10. Glycoside Hydrolase Family 10.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-xylanaseUniRule annotation (EC:3.2.1.8UniRule annotation)
Gene namesi
Name:xyl30Imported
OrganismiStreptomyces avermitilisImported
Taxonomic identifieri33903 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomyces

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 4242Sequence analysisAdd
BLAST
Chaini43 – 438396Beta-xylanaseSequence analysisPRO_5004336081Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ9X584.
SMRiQ9X584. Positions 43-435.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini41 – 341301GH10 (glycosyl hydrolase family 10)InterPro annotationAdd
BLAST
Domaini367 – 42963Ricin B-type lectinInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the glycosyl hydrolase 10 (cellulase F) family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001000. GH10.
IPR031158. GH10_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR000772. Ricin_B_lectin.
[Graphical view]
PfamiPF00331. Glyco_hydro_10. 1 hit.
PF00652. Ricin_B_lectin. 1 hit.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF50370. SSF50370. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS00591. GH10_1. 1 hit.
PS51760. GH10_2. 1 hit.
PS50231. RICIN_B_LECTIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9X584-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGFHALPRSA GRPKLRALLP ALLVGALGFA GAVAAPPPQA QAAESTLGAA
60 70 80 90 100
AAQSGRYFGV AIAANRLSDS TYASIANREF NSVTAENEMK IDATEPQRGQ
110 120 130 140 150
FNFQNADRIY NWAVQNGKQV RGHTLAWHSQ QPGWMQSLSG SALRQAMIDH
160 170 180 190 200
INGVMAHYKG KIAQWDVVNE AFADGSSGAR RDSNLERTGS DWIEVAFRTA
210 220 230 240 250
RAADPSAKLC YNDYNVENWT WAKTQAMYRM VKDFKQRGVP IDCVGFQSHF
260 270 280 290 300
NSGSPYNSNF RTTLQTFAAL GVDVAITELD IQGASPNTYA AVVNDCLAVS
310 320 330 340 350
RCLGVTVWGV RDMDSWRSSD TPLLFNNDGS KKQAYNAVLN ALNAGDGGGG
360 370 380 390 400
DPDPEPGDGT AIKGVGSGRC LDVPNASTTD GTQVQLYDCN GRTNQQWELT
410 420 430
SSGELRVYGN KCLDAAGTGN GAKVQIYSCW GGDNRSGV
Length:438
Mass (Da):46,926
Last modified:November 1, 1999 - v1
Checksum:i03D590EF3FA21689
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF121865 Genomic DNA. Translation: AAD32560.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF121865 Genomic DNA. Translation: AAD32560.1.

3D structure databases

ProteinModelPortaliQ9X584.
SMRiQ9X584. Positions 43-435.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiCBM13. Carbohydrate-Binding Module Family 13.
GH10. Glycoside Hydrolase Family 10.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Enzyme and pathway databases

BRENDAi3.2.1.8. 5980.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001000. GH10.
IPR031158. GH10_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR000772. Ricin_B_lectin.
[Graphical view]
PfamiPF00331. Glyco_hydro_10. 1 hit.
PF00652. Ricin_B_lectin. 1 hit.
[Graphical view]
PRINTSiPR00134. GLHYDRLASE10.
SMARTiSM00633. Glyco_10. 1 hit.
[Graphical view]
SUPFAMiSSF50370. SSF50370. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS00591. GH10_1. 1 hit.
PS51760. GH10_2. 1 hit.
PS50231. RICIN_B_LECTIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Xylan-binding xylanase Xyl30 from Streptomyces avermitilis: cloning, characterization, and overproduction in solid-state fermentation."
    Hernandez A., Lopez J.C., Santamaria R., Diaz M., Fernandez-Abalos J.M., Copa-Patino J.L., Soliveri J.
    Int. Microbiol. 11:133-141(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: CECT3339Imported.

Entry informationi

Entry nameiQ9X584_STRAX
AccessioniPrimary (citable) accession number: Q9X584
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1999
Last sequence update: November 1, 1999
Last modified: May 11, 2016
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.