Reviewed,
UniProtKB/Swiss-Prot Q9X1J7 (Y1509_THEMA)
Last modified
February 9, 2010.
Version 67.
History...
Clusters with 100%,
90%,
50% identity |
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: Putative metalloprotease TM_1509 EC=3.4.24.- | ||
| Gene names |
| ||
| Organism | Thermotoga maritima [Complete proteome] [HAMAP] | ||
| Taxonomic identifier | 2336 [NCBI] | ||
| Taxonomic lineage | Bacteria › Thermotogae › Thermotogales › Thermotogaceae › Thermotoga |
Protein attributes
| Sequence length | 150 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | May have metalloprotease activity Potential. Ref.2 |
| Cofactor | Binds 1 zinc ion. HAMAP MF_00009 |
| Sequence similarities | Belongs to the UPF0054 family. |
Ontologies
| Keywords | |
|---|---|
| Ligand | Metal-binding Zinc |
| Molecular function | Hydrolase Metalloprotease Protease |
| Technical term | 3D-structure Complete proteome |
| Gene Ontology (GO) | |
| Molecular function | metallopeptidase activity Inferred from electronic annotation. Source: HAMAP zinc ion bindingInferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||||||||||||||||||||||
Molecule processing | |||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 150 | 150 | Putative metalloprotease TM_1509 HAMAP MF_00009 | PRO_0000102553 | |||||||||||||||||||||||||||
Sites | |||||||||||||||||||||||||||||||
| Metal binding | 102 | 1 | Zinc; catalytic By similarity | ||||||||||||||||||||||||||||
| Metal binding | 106 | 1 | Zinc; catalytic By similarity | ||||||||||||||||||||||||||||
| Metal binding | 112 | 1 | Zinc; catalytic By similarity | ||||||||||||||||||||||||||||
Secondary structure | |||||||||||||||||||||||||||||||
Helix Strand Turn | |||||||||||||||||||||||||||||||
| Beta strand | 3 – 6 | 4 | |||||||||||||||||||||||||||||
| Helix | 11 – 16 | 6 | |||||||||||||||||||||||||||||
| Helix | 18 – 28 | 11 | |||||||||||||||||||||||||||||
| Beta strand | 35 – 38 | 4 | |||||||||||||||||||||||||||||
| Helix | 41 – 49 | 9 | |||||||||||||||||||||||||||||
| Beta strand | 59 – 61 | 3 | |||||||||||||||||||||||||||||
| Beta strand | 67 – 69 | 3 | |||||||||||||||||||||||||||||
| Beta strand | 72 – 76 | 5 | |||||||||||||||||||||||||||||
| Helix | 78 – 87 | 10 | |||||||||||||||||||||||||||||
| Helix | 92 – 108 | 17 | |||||||||||||||||||||||||||||
| Helix | 120 – 137 | 18 | |||||||||||||||||||||||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Evidence for lateral gene transfer between Archaea and Bacteria from genome sequence of Thermotoga maritima." Nelson K.E., Clayton R.A., Gill S.R., Gwinn M.L., Dodson R.J., Haft D.H., Hickey E.K., Peterson J.D., Nelson W.C., Ketchum K.A., McDonald L.A., Utterback T.R., Malek J.A., Linher K.D., Garrett M.M., Stewart A.M., Cotton M.D., Pratt M.S. Fraser C.M.Nature 399:323-329(1999) [PubMed: 10360571] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43589 / MSB8 / DSM 3109 / JCM 10099. |
| [2] | "NMR solution structure of Thermotoga maritima protein TM1509 reveals a Zn-metalloprotease-like tertiary structure." Penhoat C.H., Li Z., Atreya H.S., Kim S., Yee A., Xiao R., Murray D., Arrowsmith C.H., Szyperski T. J. Struct. Funct. Genomics 6:51-62(2005) [PubMed: 15965736] [Abstract] Cited for: STRUCTURE BY NMR, FUNCTION, ZINC BINDING. |
Cross-references
Sequence databases | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | AE000512 Genomic DNA. Translation: AAD36576.1. | ||||||||||||
| PIR | F72244. | ||||||||||||
| RefSeq | NP_229309.1. | ||||||||||||
3D structure databases | |||||||||||||
| PDBe RCSB PDB PDBj |
| ||||||||||||
| ModBase | Search... | ||||||||||||
Genome annotation databases | |||||||||||||
| GeneID | 898186. | ||||||||||||
| GenomeReviews | Gene locus TM_1509 in contig AE000512_GR. | ||||||||||||
| KEGG | tma:TM1509. | ||||||||||||
| NMPDR | fig|243274.1.peg.1493. | ||||||||||||
| TIGR | TM_1509. | ||||||||||||
Phylogenomic databases | |||||||||||||
| HOGENOM | HBG734136. | ||||||||||||
| OMA | LMEEDVY. | ||||||||||||
Enzyme and pathway databases | |||||||||||||
| BioCyc | TMAR243274:TM_1509-MONOMER. | ||||||||||||
Family and domain databases | |||||||||||||
| HAMAP | MF_00009. UPF0054. [Tree] | ||||||||||||
| InterPro | IPR002036. UPF0054. IPR020549. UPF0054_CS. [Graphical view] | ||||||||||||
| Pfam | PF02130. UPF0054. 1 hit. [Graphical view] | ||||||||||||
| TIGRFAMs | TIGR00043. UPF0054. 1 hit. | ||||||||||||
| PROSITE | PS01306. UPF0054. 1 hit. [Graphical view] | ||||||||||||
| ProtoNet | Search... | ||||||||||||
Entry information
| Entry name | Y1509_THEMA | ||||||||
| Accession | Primary (citable) accession number: Q9X1J7 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||
Relevant documents
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |
| Uncharacterized protein families (UPF) List of uncharacterized protein family (UPF) entries |

Clusters with


