Ferritin - Thermotoga maritima

Preferred order of sections

Names and origin

Protein names

Submitted name:
Ferritin EMBL AAD36204.1

Gene names

Ordered Locus Names:

TM_1128

Organism

Thermotoga maritima

Taxonomic identifier

2336 [NCBI]

Taxonomic lineage

Bacteria › Thermotogae › Thermotogales › Thermotogaceae › Thermotoga

Protein attributes

Sequence length	164 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Contains 1 ferritin-like diiron domain. RuleBase RU003668

Ontologies

Keywords
Ligand	Iron PDB 1VLG Metal-binding PDB 1VLG
Technical term	3D-structure PDB 1VLG PDB 1Z4A Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	cellular iron ion homeostasis Inferred from electronic annotation. Source: InterPro iron ion transport Inferred from electronic annotation. Source: InterPro
Molecular function	ferric iron binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Sites

Metal binding

19

1

Iron PDB 1VLG

Metal binding

52

1

Iron PDB 1VLG

Metal binding

55

1

Iron; via pros nitrogen PDB 1VLG

Sequences

Sequence

Length

Mass (Da)

Tools

Q9X0L2 [UniParc].

Last modified November 1, 1999. Version 1.
Checksum: 1C239C9E3AD045BA
Show »

FASTA

164

19,379

        10         20         30         40         50         60 
MMVISEKVRK ALNDQLNREI YSSYLYLSMA TYFDAEGFKG FAHWMKKQAQ EELTHAMKFY 

        70         80         90        100        110        120 
EYIYERGGRV ELEAIEKPPS NWNGIKDAFE AALKHEEFVT QSIYNILELA SEEKDHATVS 

       130        140        150        160 
FLKWFVDEQV EEEDQVREIL DLLEKANGQM SVIFQLDRYL GQRE

« Hide

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Evidence for lateral gene transfer between Archaea and Bacteria from genome sequence of Thermotoga maritima." Nelson K.E., Clayton R.A., Gill S.R., Gwinn M.L., Dodson R.J., Haft D.H., Hickey E.K., Peterson J.D., Nelson W.C., Ketchum K.A., McDonald L.A., Utterback T.R., Malek J.A., Linher K.D., Garrett M.M., Stewart A.M., Cotton M.D., Pratt M.S. Fraser C.M. Nature 399:323-329(1999) [PubMed: 10360571] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43589 / MSB8 / DSM 3109 / JCM 10099.
[2]	"Structure of T. maritima ferritin." Steinbacher S., Schiffmann S., Bacher A., Fischer M. Submitted (MAR-2005) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS).
[3]	"Crystal structure of Ferritin (TM1128) from Thermotoga maritima at 2.00 A resolution." Joint Center for Structural Genomics (JCSG) Submitted (JUL-2004) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (2.00 ANGSTROMS) IN COMPLEX WITH IRON.
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AE000512 Genomic DNA. Translation: AAD36204.1.

PIR

E72293.

RefSeq

NP_228934.1. NC_000853.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1VLG	X-ray	2.00	A/B/C/D/E/F/G/H	1-164	[»]
1Z4A	X-ray	2.30	A/B/C/D/E/F/G/H	1-164	[»]

ProteinModelPortal

Q9X0L2.

SMR

Q9X0L2. Positions 1-164.

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

898636.

GenomeReviews

Gene locus TM_1128 in contig AE000512_GR.

KEGG

tma:TM1128.

NMPDR

fig|243274.1.peg.1118.

PATRIC

23937191. VBITheMar51294_1144.

TIGR

TM_1128.

Phylogenomic databases

HOGENOM

HBG750128.

OMA

KDYSAFN.

PhylomeDB

Q9X0L2.

ProtClustDB

CLSK795701.

Enzyme and pathway databases

BioCyc

TMAR243274:TM_1128-MONOMER.

Family and domain databases

InterPro

IPR001519. Ferritin.
IPR009040. Ferritin-like.
IPR012347. Ferritin-rel.
IPR009078. Ferritin/RR-like.
IPR008331. Ferritin_DPS_dom.
[Graphical view]

Gene3D

G3DSA:1.20.1260.10. Ferritin_rel. 1 hit.

KO

K02217.

PANTHER

PTHR11431. Ferritin_N. 1 hit.

Pfam

PF00210. Ferritin. 1 hit.
[Graphical view]

SUPFAM

SSF47240. Ferritin/RR_like. 1 hit.

PROSITE

PS50905. FERRITIN_LIKE. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q9X0L2_THEMA

Accession

Primary (citable) accession number: Q9X0L2

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1999
Last sequence update:	November 1, 1999
Last modified:	December 14, 2011
This is version 71 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)