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Protein

Putative anti-sigma factor antagonist TM_1081

Gene

TM_1081

Organism
Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

In the phosphorylated form it could act as an anti-anti-sigma factor that counteracts an anti-sigma factor and thus releases a sigma factor from inhibition.By similarity

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Putative anti-sigma factor antagonist TM_1081
Gene namesi
Ordered Locus Names:TM_1081
OrganismiThermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Taxonomic identifieri243274 [NCBI]
Taxonomic lineageiBacteriaThermotogaeThermotogalesThermotogaceaeThermotoga
Proteomesi
  • UP000008183 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001942061 – 113Putative anti-sigma factor antagonist TM_1081Add BLAST113

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei55PhosphoserineBy similarity1

Post-translational modificationi

Phosphorylated on a serine residue.By similarity

Keywords - PTMi

Phosphoprotein

Interactioni

Protein-protein interaction databases

STRINGi243274.TM1081.

Structurei

Secondary structure

1113
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi4 – 7Combined sources4
Beta strandi10 – 13Combined sources4
Turni21 – 23Combined sources3
Helixi24 – 34Combined sources11
Helixi36 – 38Combined sources3
Beta strandi42 – 46Combined sources5
Helixi55 – 71Combined sources17
Beta strandi74 – 78Combined sources5
Helixi82 – 90Combined sources9
Helixi93 – 95Combined sources3
Beta strandi97 – 102Combined sources6
Helixi103 – 111Combined sources9

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2KA5NMR-A1-113[»]
3F43X-ray1.59A1-113[»]
ProteinModelPortaliQ9X0H0.
SMRiQ9X0H0.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9X0H0.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 110STASPROSITE-ProRule annotationAdd BLAST110

Sequence similaritiesi

Contains 1 STAS domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG410682B. Bacteria.
ENOG410XUXE. LUCA.
InParanoidiQ9X0H0.
OMAiVVILMPN.

Family and domain databases

Gene3Di3.30.750.24. 1 hit.
InterProiIPR003658. Anti-sigma_ant.
IPR002645. STAS_dom.
[Graphical view]
PfamiPF01740. STAS. 1 hit.
[Graphical view]
SUPFAMiSSF52091. SSF52091. 1 hit.
TIGRFAMsiTIGR00377. ant_ant_sig. 1 hit.
PROSITEiPS50801. STAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9X0H0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFPYKIVDDV VILMPNKELN IENAHLFKKW VFDEFLNKGY NKIFLVLSDV
60 70 80 90 100
ESIDSFSLGV IVNILKSISS SGGFFALVSP NEKVERVLSL TNLDRIVKIY
110
DTISEAMEEV RRK
Length:113
Mass (Da):12,973
Last modified:November 1, 1999 - v1
Checksum:i88603AF80637DA4E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000512 Genomic DNA. Translation: AAD36158.1.
PIRiA72297.
RefSeqiNP_228887.1. NC_000853.1.
WP_004080402.1. NZ_CP011107.1.

Genome annotation databases

EnsemblBacteriaiAAD36158; AAD36158; TM_1081.
GeneIDi897065.
KEGGitma:TM1081.
PATRICi23937091. VBITheMar51294_1094.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000512 Genomic DNA. Translation: AAD36158.1.
PIRiA72297.
RefSeqiNP_228887.1. NC_000853.1.
WP_004080402.1. NZ_CP011107.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2KA5NMR-A1-113[»]
3F43X-ray1.59A1-113[»]
ProteinModelPortaliQ9X0H0.
SMRiQ9X0H0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi243274.TM1081.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAD36158; AAD36158; TM_1081.
GeneIDi897065.
KEGGitma:TM1081.
PATRICi23937091. VBITheMar51294_1094.

Phylogenomic databases

eggNOGiENOG410682B. Bacteria.
ENOG410XUXE. LUCA.
InParanoidiQ9X0H0.
OMAiVVILMPN.

Miscellaneous databases

EvolutionaryTraceiQ9X0H0.

Family and domain databases

Gene3Di3.30.750.24. 1 hit.
InterProiIPR003658. Anti-sigma_ant.
IPR002645. STAS_dom.
[Graphical view]
PfamiPF01740. STAS. 1 hit.
[Graphical view]
SUPFAMiSSF52091. SSF52091. 1 hit.
TIGRFAMsiTIGR00377. ant_ant_sig. 1 hit.
PROSITEiPS50801. STAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiY1081_THEMA
AccessioniPrimary (citable) accession number: Q9X0H0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: November 1, 1999
Last modified: November 2, 2016
This is version 102 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.