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Protein
Submitted name:

Transcriptional regulator, TetR family

Gene

TM_1030

Organism
Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi25 – 44H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator, TetR familyImported
Gene namesi
Ordered Locus Names:TM_1030Imported
OrganismiThermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)Imported
Taxonomic identifieri243274 [NCBI]
Taxonomic lineageiBacteriaThermotogaeThermotogalesThermotogaceaeThermotoga
Proteomesi
  • UP000008183 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Interactioni

Protein-protein interaction databases

STRINGi243274.TM1030.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1Z77X-ray2.00A1-200[»]
1ZKGX-ray2.30A/B1-200[»]
2ID6X-ray1.75A1-200[»]
2IEKX-ray1.83A1-200[»]
3IH2X-ray2.30A1-200[»]
3IH3X-ray2.35A1-200[»]
3IH4X-ray2.30A1-200[»]
4I6ZX-ray3.20A/B1-200[»]
4I76X-ray2.10A/B1-200[»]
ProteinModelPortaliQ9X0C0.
SMRiQ9X0C0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 62HTH tetR-typeInterPro annotationAdd BLAST61

Phylogenomic databases

eggNOGiENOG4105Z3X. Bacteria.
COG1309. LUCA.
OMAiALKFLMW.

Family and domain databases

InterProiView protein in InterPro
IPR023772. DNA-bd_HTH_TetR-type_CS.
IPR009057. Homeobox-like_sf.
IPR001647. HTH_TetR.
IPR036271. Tet_transcr_reg_TetR-rel_C_sf.
PfamiView protein in Pfam
PF00440. TetR_N. 1 hit.
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiView protein in PROSITE
PS01081. HTH_TETR_1. 1 hit.
PS50977. HTH_TETR_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9X0C0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSKRDAILK AAVEVFGKKG YDRATTDEIA EKAGVAKGLI FHYFKNKEEL
60 70 80 90 100
YYQAYMSVTE KLQKEFENFL MKNRNRDIFD FMERWIEKKL EYSASHPEEA
110 120 130 140 150
DFLITLVSVD EGLRKRILLD LEKSQRVFFD FVREKLKDLD LAEDVTEEIA
160 170 180 190 200
LKFLMWFFSG FEEVYLRTYQ GKPELLKRDM NTLVEEVKVM LRILKKGMTK
Length:200
Mass (Da):23,801
Last modified:November 1, 1999 - v1
Checksum:iCBF79565CB2D4273
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000512 Genomic DNA. Translation: AAD36107.1.
PIRiE72303.
RefSeqiNP_228836.1. NC_000853.1.
WP_010865247.1. NZ_CP011107.1.

Genome annotation databases

EnsemblBacteriaiAAD36107; AAD36107; TM_1030.
GeneIDi897092.
KEGGitma:TM1030.
tmi:THEMA_09210.
PATRICifig|243274.18.peg.1785.

Similar proteinsi

Entry informationi

Entry nameiQ9X0C0_THEMA
AccessioniPrimary (citable) accession number: Q9X0C0
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1999
Last sequence update: November 1, 1999
Last modified: November 22, 2017
This is version 127 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported