Q9X055 (Q9X055_THEMA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribokinase EMBL AAD36039.1

Gene names

Ordered Locus Names:

TM_0960

Organism

Thermotoga maritima

Taxonomic identifier

2336 [NCBI]

Taxonomic lineage

Bacteria › Thermotogae › Thermotogales › Thermotogaceae › Thermotoga

Protein attributes

Sequence length	299 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the carbohydrate kinase pfkB family. RuleBase RU003704

Ontologies

Keywords
Molecular function	Kinase SAAS SAAS002173 RuleBase RU003704 EMBL AAD36039.1 Transferase
Technical term	3D-structure PDB 1VM7 Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	D-ribose metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	ribokinase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9X055 [UniParc]. Last modified November 1, 1999. Version 1. Checksum: 0EBC29B191AE57FC	FASTA	299	32,654
	10 20 30 40 50 60 MFLVISVVGS SNIDIVLKVD HFTKPGETQK AIEMNVFPGG KGANQAVTVA KIGEKGCRFV 70 80 90 100 110 120 TCIGNDDYSD LLIENYEKLG ITGYIRVSLP TGRAFIEVDK TGQNRIIIFP GANAELKKEL 130 140 150 160 170 180 IDWNTLSESD ILLLQNEIPF ETTLECAKRF NGIVIFDPAP AQGINEEIFQ YLDYLTPNEK 190 200 210 220 230 240 EIEALSKDFF GEFLTVEKAA EKFLELGVKN VIVKLGDKGV LLVNKNEKKH FPTFKVKAVD 250 260 270 280 290 TTAAGDVFNG AFAVALSEGK NPEEAVIFGT AAAAISVTRL GAQSSIPARE EVEAFLKNL

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Evidence for lateral gene transfer between Archaea and Bacteria from genome sequence of Thermotoga maritima." Nelson K.E., Clayton R.A., Gill S.R., Gwinn M.L., Dodson R.J., Haft D.H., Hickey E.K., Peterson J.D., Nelson W.C., Ketchum K.A., McDonald L.A., Utterback T.R., Malek J.A., Linher K.D., Garrett M.M., Stewart A.M., Cotton M.D., Pratt M.S. , Phillips C.A., Richardson D.L., Heidelberg J.F., Sutton G.G., Fleischmann R.D., Eisen J.A., White O., Salzberg S.L., Smith H.O., Venter J.C., Fraser C.M. Nature 399:323-329(1999) [PubMed: 10360571] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43589 / MSB8 / DSM 3109 / JCM 10099.
[2]	"Crystal structure of Ribokinase (TM0960) from Thermotoga maritima at 2.15 A resolution." Joint Center for Structural Genomics (JCSG) Submitted (SEP-2004) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (2.15 ANGSTROMS).
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AE000512 Genomic DNA. Translation: AAD36039.1.

PIR

E72311.

RefSeq

NP_228768.1. NC_000853.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1VM7	X-ray	2.15	A/B	1-299	[»]

ProteinModelPortal

Q9X055.

SMR

Q9X055. Positions 1-299.

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

898697.

GenomeReviews

Gene locus TM_0960 in contig AE000512_GR.

KEGG

tma:TM0960.

NMPDR

fig|243274.1.peg.952.

PATRIC

23936851. VBITheMar51294_0974.

TIGR

TM_0960.

Phylogenomic databases

HOGENOM

HBG697973.

OMA

IPTRQET.

PhylomeDB

Q9X055.

ProtClustDB

CLSK875501.

Enzyme and pathway databases

BioCyc

TMAR243274:TM_0960-MONOMER.

Family and domain databases

InterPro

IPR011611. Carb/pur_kinase.
IPR002173. Carboh/pur_kinase_PfkB_CS.
IPR011877. D_ribokin_bac.
IPR002139. Ribokinase.
[Graphical view]

KO

K00852.

Pfam

PF00294. PfkB. 1 hit.
[Graphical view]

PRINTS

PR00990. RIBOKINASE.

TIGRFAMs

TIGR02152. D_ribokin_bact. 1 hit.

PROSITE

PS00584. PFKB_KINASES_2. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q9X055_THEMA

Accession

Primary (citable) accession number: Q9X055

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1999
Last sequence update:	November 1, 1999
Last modified:	December 14, 2011
This is version 62 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)