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Protein
Submitted name:

Ribokinase

Gene

TM_0960

Organism
Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

KinaseUniRule annotationSAAS annotationImported, Transferase

Enzyme and pathway databases

BioCyciTMAR243274:GC6P-990-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
RibokinaseImported
Gene namesi
Ordered Locus Names:TM_0960Imported
OrganismiThermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)Imported
Taxonomic identifieri243274 [NCBI]
Taxonomic lineageiBacteriaThermotogaeThermotogalesThermotogaceaeThermotoga
Proteomesi
  • UP000008183 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi243274.TM0960.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1VM7X-ray2.15A/B1-299[»]
ProteinModelPortaliQ9X055.
SMRiQ9X055. Positions 1-299.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9X055.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini5 – 288284PfkBInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the carbohydrate kinase PfkB family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108RVA. Bacteria.
COG0524. LUCA.
InParanoidiQ9X055.
KOiK00852.
OMAiGDARHYP.
OrthoDBiEOG64JFMD.

Family and domain databases

Gene3Di3.40.1190.20. 1 hit.
InterProiIPR002173. Carboh/pur_kinase_PfkB_CS.
IPR011877. D_ribokin_bac.
IPR011611. PfkB_dom.
IPR002139. Ribokinase.
IPR029056. Ribokinase-like.
[Graphical view]
PfamiPF00294. PfkB. 1 hit.
[Graphical view]
PRINTSiPR00990. RIBOKINASE.
SUPFAMiSSF53613. SSF53613. 1 hit.
TIGRFAMsiTIGR02152. D_ribokin_bact. 1 hit.
PROSITEiPS00584. PFKB_KINASES_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9X055-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFLVISVVGS SNIDIVLKVD HFTKPGETQK AIEMNVFPGG KGANQAVTVA
60 70 80 90 100
KIGEKGCRFV TCIGNDDYSD LLIENYEKLG ITGYIRVSLP TGRAFIEVDK
110 120 130 140 150
TGQNRIIIFP GANAELKKEL IDWNTLSESD ILLLQNEIPF ETTLECAKRF
160 170 180 190 200
NGIVIFDPAP AQGINEEIFQ YLDYLTPNEK EIEALSKDFF GEFLTVEKAA
210 220 230 240 250
EKFLELGVKN VIVKLGDKGV LLVNKNEKKH FPTFKVKAVD TTAAGDVFNG
260 270 280 290
AFAVALSEGK NPEEAVIFGT AAAAISVTRL GAQSSIPARE EVEAFLKNL
Length:299
Mass (Da):32,654
Last modified:November 1, 1999 - v1
Checksum:i0EBC29B191AE57FC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000512 Genomic DNA. Translation: AAD36039.1.
PIRiE72311.
RefSeqiNP_228768.1. NC_000853.1.
WP_010865225.1. NC_000853.1.

Genome annotation databases

EnsemblBacteriaiAAD36039; AAD36039; TM_0960.
GeneIDi898697.
KEGGitma:TM0960.
PATRICi23936851. VBITheMar51294_0974.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000512 Genomic DNA. Translation: AAD36039.1.
PIRiE72311.
RefSeqiNP_228768.1. NC_000853.1.
WP_010865225.1. NC_000853.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1VM7X-ray2.15A/B1-299[»]
ProteinModelPortaliQ9X055.
SMRiQ9X055. Positions 1-299.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi243274.TM0960.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAD36039; AAD36039; TM_0960.
GeneIDi898697.
KEGGitma:TM0960.
PATRICi23936851. VBITheMar51294_0974.

Phylogenomic databases

eggNOGiENOG4108RVA. Bacteria.
COG0524. LUCA.
InParanoidiQ9X055.
KOiK00852.
OMAiGDARHYP.
OrthoDBiEOG64JFMD.

Enzyme and pathway databases

BioCyciTMAR243274:GC6P-990-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ9X055.

Family and domain databases

Gene3Di3.40.1190.20. 1 hit.
InterProiIPR002173. Carboh/pur_kinase_PfkB_CS.
IPR011877. D_ribokin_bac.
IPR011611. PfkB_dom.
IPR002139. Ribokinase.
IPR029056. Ribokinase-like.
[Graphical view]
PfamiPF00294. PfkB. 1 hit.
[Graphical view]
PRINTSiPR00990. RIBOKINASE.
SUPFAMiSSF53613. SSF53613. 1 hit.
TIGRFAMsiTIGR02152. D_ribokin_bact. 1 hit.
PROSITEiPS00584. PFKB_KINASES_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43589 / MSB8 / DSM 3109 / JCM 10099Imported.
  2. "Crystal structure of Ribokinase (TM0960) from Thermotoga maritima at 2.15 A resolution."
    Joint Center for Structural Genomics (JCSG)
    Submitted (SEP-2004) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.15 ANGSTROMS).

Entry informationi

Entry nameiQ9X055_THEMA
AccessioniPrimary (citable) accession number: Q9X055
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1999
Last sequence update: November 1, 1999
Last modified: March 16, 2016
This is version 99 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.