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Protein
Submitted name:

Transcriptional regulator, MarR family

Gene

TM_0710

Organism
Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciTMAR243274:GC6P-736-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator, MarR familyImported
Gene namesi
Ordered Locus Names:TM_0710Imported
ORF Names:Tmari_0710Imported
OrganismiThermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)Imported
Taxonomic identifieri243274 [NCBI]
Taxonomic lineageiBacteriaThermotogaeThermotogalesThermotogaceaeThermotoga
Proteomesi
  • UP000013901 Componenti: Chromosome
  • UP000008183 Componenti: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi13 – 13InterchainCombined sources

Interactioni

Protein-protein interaction databases

STRINGi243274.TM0710.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2A61X-ray1.80A/B/C/D1-143[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 134134HTH marR-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 4 HTH marR-type DNA-binding domains.UniRule annotation

Phylogenomic databases

eggNOGiENOG41067TZ. Bacteria.
ENOG410XUB6. LUCA.
OMAiMADYSPF.
OrthoDBiEOG6B62DJ.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR000835. HTH_MarR-typ.
IPR023187. Tscrpt_reg_MarR-type_CS.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF01047. MarR. 1 hit.
[Graphical view]
PRINTSiPR00598. HTHMARR.
SMARTiSM00347. HTH_MARR. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS01117. HTH_MARR_1. 1 hit.
PS50995. HTH_MARR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9WZG9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKQPFERILR EICFMVKVEG RKVLRDFGIT PAQFDILQKI YFEGPKRPGE
60 70 80 90 100
LSVLLGVAKS TVTGLVKRLE ADGYLTRTPD PADRRAYFLV ITRKGEEVIE
110 120 130 140
KVIERRENFI EKITSDLGKE KSSKILDYLK ELKGVMERNF SKQ
Length:143
Mass (Da):16,567
Last modified:November 1, 1999 - v1
Checksum:i93049E8958F3ADE2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000512 Genomic DNA. Translation: AAD35792.1.
CP004077 Genomic DNA. Translation: AGL49635.1.
PIRiE72343.
RefSeqiNP_228519.1. NC_000853.1.
WP_004081029.1. NZ_CP011107.1.

Genome annotation databases

EnsemblBacteriaiAAD35792; AAD35792; TM_0710.
AGL49635; AGL49635; Tmari_0710.
GeneIDi898377.
KEGGitma:TM0710.
tmi:THEMA_01115.
tmm:Tmari_0710.
tmw:THMA_0725.
PATRICi23936338. VBITheMar51294_0722.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000512 Genomic DNA. Translation: AAD35792.1.
CP004077 Genomic DNA. Translation: AGL49635.1.
PIRiE72343.
RefSeqiNP_228519.1. NC_000853.1.
WP_004081029.1. NZ_CP011107.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2A61X-ray1.80A/B/C/D1-143[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi243274.TM0710.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAD35792; AAD35792; TM_0710.
AGL49635; AGL49635; Tmari_0710.
GeneIDi898377.
KEGGitma:TM0710.
tmi:THEMA_01115.
tmm:Tmari_0710.
tmw:THMA_0725.
PATRICi23936338. VBITheMar51294_0722.

Phylogenomic databases

eggNOGiENOG41067TZ. Bacteria.
ENOG410XUB6. LUCA.
OMAiMADYSPF.
OrthoDBiEOG6B62DJ.

Enzyme and pathway databases

BioCyciTMAR243274:GC6P-736-MONOMER.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR000835. HTH_MarR-typ.
IPR023187. Tscrpt_reg_MarR-type_CS.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF01047. MarR. 1 hit.
[Graphical view]
PRINTSiPR00598. HTHMARR.
SMARTiSM00347. HTH_MARR. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS01117. HTH_MARR_1. 1 hit.
PS50995. HTH_MARR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43589 / MSB8 / DSM 3109 / JCM 10099Imported and MSB8Imported.
  2. "The crystal structure of transcriptional regulator Tm0710 from Thermotoga maritima."
    Lunin V.V., Evdokimova E., Kudritska M., Chang C., Joachimiak A., Edwards A., Savchenko A.
    Submitted (JUL-2005) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS), DISULFIDE BONDS.
  3. "The genome organization of Thermotoga maritima reflects its lifestyle."
    Latif H., Lerman J.A., Portnoy V.A., Tarasova Y., Nagarajan H., Schrimpe-Rutledge A.C., Smith R.D., Adkins J.N., Lee D.H., Qiu Y., Zengler K.
    PLoS Genet. 9:E1003485-E1003485(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43589 / MSB8 / DSM 3109 / JCM 10099Imported and MSB8Imported.

Entry informationi

Entry nameiQ9WZG9_THEMA
AccessioniPrimary (citable) accession number: Q9WZG9
Secondary accession number(s): G4FDB4
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1999
Last sequence update: November 1, 1999
Last modified: July 6, 2016
This is version 111 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.