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Q9WZ72 (RS6_THEMA) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 67. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
30S ribosomal protein S6
Gene names
Name:rpsF
Ordered Locus Names:TM_0603
OrganismThermotoga maritima
Taxonomic identifier2336 [NCBI]
Taxonomic lineageBacteria › Thermotogae › Thermotogales › Thermotogaceae › Thermotoga

Protein attributes

Sequence length128 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Binds together with S18 to 16S ribosomal RNA By similarity. HAMAP MF_00360

Sequence similarities

Belongs to the ribosomal protein S6P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical term3D-structure
Complete proteome
Reference proteome
Gene Ontology (GO)
   Biological processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 12812830S ribosomal protein S6 HAMAP MF_00360
PRO_0000176861

Secondary structure

1 ................. 128
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
Q9WZ72 [UniParc].

Last modified November 1, 1999. Version 1.
Checksum: A151E99D8BFF7A48

FASTA12815,369
        10         20         30         40         50         60 
MAYVKERIYE SMFIIAPNVP EEERENLVER VKKIIEERVK GKIDKVERMG MRKFAYEIKK 

        70         80         90        100        110        120 
FNEGDYTVIY FRCDGQNLQE LENFYRVTPE IIRWQTFRRF DLEKKERKAQ REKAAAEATE 


SSEGGSED

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE000512 Genomic DNA. Translation: AAD35688.1.
PIRG72354.
RefSeqNP_228413.1. NC_000853.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1VMBX-ray1.70A1-128[»]
ProteinModelPortalQ9WZ72.
SMRQ9WZ72. Positions 5-111.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID897684.
GenomeReviewsGene locus TM_0603 in contig AE000512_GR.
KEGGtma:TM0603.
NMPDRfig|243274.1.peg.597.
PATRIC23936121. VBITheMar51294_0614.
TIGRTM_0603.

Phylogenomic databases

HOGENOMHBG747554.
OMARIYETMF.
PhylomeDBQ9WZ72.
ProtClustDBPRK00453.

Enzyme and pathway databases

BioCycTMAR243274:TM_0603-MONOMER.

Family and domain databases

HAMAPMF_00360. Ribosomal_S6.
[Tree]
InterProIPR000529. Ribosomal_S6.
IPR020814. Ribosomal_S6_plastid/chlpt.
IPR014717. Transl_elong_EF1B/ribosomal_S6.
[Graphical view]
Gene3DG3DSA:3.30.70.60. Transl_elong_EF1B/rib_con. 1 hit.
KOK02990.
PfamPF01250. Ribosomal_S6. 1 hit.
[Graphical view]
SUPFAMSSF54995. Ribosomal_S6. 1 hit.
TIGRFAMsTIGR00166. S6. 1 hit.
PROSITEPS01048. RIBOSOMAL_S6. False negative.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRS6_THEMA
AccessionPrimary (citable) accession number: Q9WZ72
Entry history
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: November 1, 1999
Last modified: January 25, 2012
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Ribosomal proteins

Ribosomal proteins families and list of entries

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

SIMILARITY comments

Index of protein domains and families

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