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Protein
Submitted name:

Exo-poly-alpha-D-galacturonosidase, putative

Gene

TM_0437

Organism
Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Enzyme and pathway databases

BioCyciMetaCyc:MONOMER-17963.
TMAR243274:GC6P-452-MONOMER.

Protein family/group databases

CAZyiGH28. Glycoside Hydrolase Family 28.

Names & Taxonomyi

Protein namesi
Submitted name:
Exo-poly-alpha-D-galacturonosidase, putativeImported
Gene namesi
Ordered Locus Names:TM_0437Imported
OrganismiThermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)Imported
Taxonomic identifieri243274 [NCBI]
Taxonomic lineageiBacteriaThermotogaeThermotogalesThermotogaceaeThermotoga
Proteomesi
  • UP000008183 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi243274.TM0437.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3JURX-ray2.05A/B/C/D1-448[»]
ProteinModelPortaliQ9WYR8.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9WYR8.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 28 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105E4I. Bacteria.
COG5434. LUCA.
InParanoidiQ9WYR8.
OMAiGHYLRPS.

Family and domain databases

Gene3Di2.160.20.10. 1 hit.
InterProiIPR000743. Glyco_hydro_28.
IPR024535. Pectate_lyase_SF_prot.
IPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
[Graphical view]
PfamiPF00295. Glyco_hydro_28. 1 hit.
PF12708. Pectate_lyase_3. 1 hit.
[Graphical view]
SUPFAMiSSF51126. SSF51126. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9WYR8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIMEELAKKI EEEILNHVRE PQIPDREVNL LDFGARGDGR TDCSESFKRA
60 70 80 90 100
IEELSKQGGG RLIVPEGVFL TGPIHLKSNI ELHVKGTIKF IPDPERYLPV
110 120 130 140 150
VLTRFEGIEL YNYSPLVYAL DCENVAITGS GVLDGSADNE HWWPWKGKKD
160 170 180 190 200
FGWKEGLPNQ QEDVKKLKEM AERGTPVEER VFGKGHYLRP SFVQFYRCRN
210 220 230 240 250
VLVEGVKIIN SPMWCVHPVL SENVIIRNIE ISSTGPNNDG IDPESCKYML
260 270 280 290 300
IEKCRFDTGD DSVVIKSGRD ADGRRIGVPS EYILVRDNLV ISQASHGGLV
310 320 330 340 350
IGSEMSGGVR NVVARNNVYM NVERALRLKT NSRRGGYMEN IFFIDNVAVN
360 370 380 390 400
VSEEVIRINL RYDNEEGEYL PVVRSVFVKN LKATGGKYAV RIEGLENDYV
410 420 430 440
KDILISDTII EGAKISVLLE FGQLGMENVI MNGSRFEKLY IEGKALLK
Length:448
Mass (Da):50,484
Last modified:November 1, 1999 - v1
Checksum:iC18A6741BC0D0C09
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000512 Genomic DNA. Translation: AAD35522.1.
PIRiH72376.
RefSeqiNP_228247.1. NC_000853.1.
WP_010865120.1. NC_000853.1.

Genome annotation databases

EnsemblBacteriaiAAD35522; AAD35522; TM_0437.
GeneIDi897452.
KEGGitma:TM0437.
PATRICi23935759. VBITheMar51294_0443.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000512 Genomic DNA. Translation: AAD35522.1.
PIRiH72376.
RefSeqiNP_228247.1. NC_000853.1.
WP_010865120.1. NC_000853.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3JURX-ray2.05A/B/C/D1-448[»]
ProteinModelPortaliQ9WYR8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi243274.TM0437.

Protein family/group databases

CAZyiGH28. Glycoside Hydrolase Family 28.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAD35522; AAD35522; TM_0437.
GeneIDi897452.
KEGGitma:TM0437.
PATRICi23935759. VBITheMar51294_0443.

Phylogenomic databases

eggNOGiENOG4105E4I. Bacteria.
COG5434. LUCA.
InParanoidiQ9WYR8.
OMAiGHYLRPS.

Enzyme and pathway databases

BioCyciMetaCyc:MONOMER-17963.
TMAR243274:GC6P-452-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ9WYR8.

Family and domain databases

Gene3Di2.160.20.10. 1 hit.
InterProiIPR000743. Glyco_hydro_28.
IPR024535. Pectate_lyase_SF_prot.
IPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
[Graphical view]
PfamiPF00295. Glyco_hydro_28. 1 hit.
PF12708. Pectate_lyase_3. 1 hit.
[Graphical view]
SUPFAMiSSF51126. SSF51126. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ9WYR8_THEMA
AccessioniPrimary (citable) accession number: Q9WYR8
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1999
Last sequence update: November 1, 1999
Last modified: September 7, 2016
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.