Q9WYE6 (Q9WYE6_THEMA) Unreviewed, UniProtKB/TrEMBL
Last modified
January 25, 2012.
Version 53.
History...
Clusters with 
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Beta-galactosidase PIRNR PIRNR001084 Short name=Beta-gal PIRNR PIRNR001084 EC=3.2.1.23 PIRNR PIRNR001084 | ||
| Gene names |
| ||
| Organism | Thermotoga maritima | ||
| Taxonomic identifier | 2336 [NCBI] | ||
| Taxonomic lineage | Bacteria › Thermotogae › Thermotogales › Thermotogaceae › Thermotoga |
Protein attributes
| Sequence length | 672 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. PIRNR PIRNR001084 |
| Sequence similarities | Belongs to the glycosyl hydrolase 42 family. PIRNR PIRNR001084 |
Ontologies
| Keywords | |
|---|---|
| Ligand | Metal-binding PIRSR PIRSR001084-3 Zinc PIRSR PIRSR001084-3 |
| Molecular function | Glycosidase PIRNR PIRNR001084 Hydrolase |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro |
| Cellular component | beta-galactosidase complex Inferred from electronic annotation. Source: InterPro |
| Molecular function | beta-galactosidase activity Inferred from electronic annotation. Source: EC cation bindingInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Sites | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Active site | 150 | 1 | Proton donor By similarity PIRSR PIRSR001084-1 | ||||||
| Active site | 311 | 1 | Nucleophile By similarity PIRSR PIRSR001084-1 | ||||||
| Metal binding | 115 | 1 | Zinc By similarity PIRSR PIRSR001084-3 | ||||||
| Metal binding | 155 | 1 | Zinc By similarity PIRSR PIRSR001084-3 | ||||||
| Metal binding | 157 | 1 | Zinc By similarity PIRSR PIRSR001084-3 | ||||||
| Metal binding | 160 | 1 | Zinc By similarity PIRSR PIRSR001084-3 | ||||||
| Binding site | 111 | 1 | Substrate By similarity PIRSR PIRSR001084-2 | ||||||
| Binding site | 149 | 1 | Substrate By similarity PIRSR PIRSR001084-2 | ||||||
| Binding site | 319 | 1 | Substrate By similarity PIRSR PIRSR001084-2 | ||||||
Sequences
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References
| [1] | "Evidence for lateral gene transfer between Archaea and Bacteria from genome sequence of Thermotoga maritima." Nelson K.E., Clayton R.A., Gill S.R., Gwinn M.L., Dodson R.J., Haft D.H., Hickey E.K., Peterson J.D., Nelson W.C., Ketchum K.A., McDonald L.A., Utterback T.R., Malek J.A., Linher K.D., Garrett M.M., Stewart A.M., Cotton M.D., Pratt M.S.  Fraser C.M.Nature 399:323-329(1999) [PubMed: 10360571] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43589 / MSB8 / DSM 3109 / JCM 10099. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AE000512 Genomic DNA. Translation: AAD35398.1. |
| PIR | E72391. |
| RefSeq | NP_228122.1. NC_000853.1. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1KWG based on UniProtKB O69315. |
| ProteinModelPortal | Q9WYE6. |
| ModBase | Search... |
Protein family/group databases | |
| CAZy | GH42. Glycoside Hydrolase Family 42. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 897246. |
| GenomeReviews | Gene locus TM_0310 in contig AE000512_GR. |
| KEGG | tma:TM0310. |
| NMPDR | fig|243274.1.peg.306. |
| PATRIC | 23935499. VBITheMar51294_0315. |
| TIGR | TM_0310. |
Phylogenomic databases | |
| HOGENOM | HBG476453. |
| OMA | MFFQLRQ. |
| PhylomeDB | Q9WYE6. |
| ProtClustDB | CLSK793327. |
Enzyme and pathway databases | |
| BioCyc | TMAR243274:TM_0310-MONOMER. |
Family and domain databases | |
| InterPro | IPR013739. Beta_galactosidase_C. IPR013738. Beta_galactosidase_Trimer. IPR003476. Glyco_hydro_42. IPR013529. Glyco_hydro_42_N. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view] |
| Gene3D | G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. |
| KO | K12308. |
| Pfam | PF02449. Glyco_hydro_42. 1 hit. PF08533. Glyco_hydro_42C. 1 hit. PF08532. Glyco_hydro_42M. 1 hit. [Graphical view] |
| PIRSF | PIRSF001084. B-galactosidase. 1 hit. |
| SUPFAM | SSF51445. Glyco_hydro_cat. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | Q9WYE6_THEMA | ||||||||
| Accession | Primary (citable) accession number: Q9WYE6 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||