Q9WXS5 (Q9WXS5_THEMA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Endo-1,4-beta-xylanase B EMBL AAD35164.1

Gene names

Ordered Locus Names:

TM_0070

Organism

Thermotoga maritima

Taxonomic identifier

2336 [NCBI]

Taxonomic lineage

Bacteria › Thermotogae › Thermotogales › Thermotogaceae › Thermotoga

Protein attributes

Sequence length	347 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 10 (cellulase F) family. RuleBase RU003432

Ontologies

Keywords
Biological process	Xylan degradation EMBL AAD35164.1
Molecular function	Glycosidase RuleBase RU003432 Hydrolase
Technical term	3D-structure PDB 1VBU PDB 1VBR Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9WXS5 [UniParc]. Last modified November 1, 1999. Version 1. Checksum: EF9F024C4DE64FD2	FASTA	347	40,675
	10 20 30 40 50 60 MKILPSVLIL LLGCVPVFSS QNVSLRELAE KLNIYIGFAA INNFWSLSDA EKYMEVARRE 70 80 90 100 110 120 FNILTPENQM KWDTIHPERD RYNFTPAEKH VEFAEENDMI VHGHTLVWHN QLPGWITGRE 130 140 150 160 170 180 WTKEELLNVL EDHIKTVVSH FKGRVKIWDV VNEAVSDSGT YRESVWYKTI GPEYIEKAFR 190 200 210 220 230 240 WAKEADPDAI LIYNDYSIEE INAKSNFVYN MIKELKEKGV PVDGIGFQMH IDYRGLNYDS 250 260 270 280 290 300 FRRNLERFAK LGLQIYITEM DVRIPLSGSE EYYLKKQAEV CAKIFDICLD NPAVKAIQFW 310 320 330 340 GFTDKYSWVP GFFKGYGKAL LFDENYNPKP CYYAIKEVLE KKIEERK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Evidence for lateral gene transfer between Archaea and Bacteria from genome sequence of Thermotoga maritima." Nelson K.E., Clayton R.A., Gill S.R., Gwinn M.L., Dodson R.J., Haft D.H., Hickey E.K., Peterson J.D., Nelson W.C., Ketchum K.A., McDonald L.A., Utterback T.R., Malek J.A., Linher K.D., Garrett M.M., Stewart A.M., Cotton M.D., Pratt M.S. , Phillips C.A., Richardson D.L., Heidelberg J.F., Sutton G.G., Fleischmann R.D., Eisen J.A., White O., Salzberg S.L., Smith H.O., Venter J.C., Fraser C.M. Nature 399:323-329(1999) [PubMed: 10360571] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43589 / MSB8 / DSM 3109 / JCM 10099.
[2]	"Structural basis of the substrate subsite and the highly thermal stability of xylanase 10B from Thermotoga maritima MSB8." Ihsanawati, Kumasaka T., Kaneko T., Morokuma C., Yatsunami R., Sato T., Nakamura S., Tanaka N. Proteins 61:999-1009(2005) [PubMed: 16247799] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) OF 20-347.
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AE000512 Genomic DNA. Translation: AAD35164.1.

PIR

B72423.

RefSeq

NP_227886.1. NC_000853.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1VBR	X-ray	1.80	A/B	20-347	[»]
1VBU	X-ray	1.80	A/B	20-347	[»]

ProteinModelPortal

Q9WXS5.

SMR

Q9WXS5. Positions 23-346.

ModBase

Search...

Protein family/group databases

CAZy

GH10. Glycoside Hydrolase Family 10.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

896895.

GenomeReviews

Gene locus TM_0070 in contig AE000512_GR.

KEGG

tma:TM0070.

NMPDR

fig|243274.1.peg.70.

PATRIC

23934980. VBITheMar51294_0068.

TIGR

TM_0070.

Phylogenomic databases

HOGENOM

HBG626574.

OMA

SWVPGFF.

ProtClustDB

CLSK794885.

Enzyme and pathway databases

BioCyc

TMAR243274:TM_0070-MONOMER.

Family and domain databases

InterPro

IPR001000. Glyco_hydro_10.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]

Gene3D

G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.

KO

K01181.

Pfam

PF00331. Glyco_hydro_10. 1 hit.
[Graphical view]

PRINTS

PR00134. GLHYDRLASE10.

SMART

SM00633. Glyco_10. 1 hit.
[Graphical view]

SUPFAM

SSF51445. Glyco_hydro_cat. 1 hit.

ProtoNet

Search...

Entry information

Entry name

Q9WXS5_THEMA

Accession

Primary (citable) accession number: Q9WXS5

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1999
Last sequence update:	November 1, 1999
Last modified:	December 14, 2011
This is version 59 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)