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Protein
Submitted name:

Transcriptional regulator, IclR family

Gene

TM_0065

Organism
Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator, IclR familyImported
Gene namesi
Ordered Locus Names:TM_0065Imported
OrganismiThermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)Imported
Taxonomic identifieri243274 [NCBI]
Taxonomic lineageiBacteriaThermotogaeThermotogalesThermotogaceaeThermotoga
Proteomesi
  • UP000008183 Componenti: Chromosome

Pathology & Biotechi

Chemistry databases

DrugBankiDB01942. Formic Acid.

Interactioni

Protein-protein interaction databases

STRINGi243274.TM0065.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1MKMX-ray2.20A/B1-246[»]
SMRiQ9WXS0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 62HTH iclR-typeInterPro annotationAdd BLAST62
Domaini63 – 246IclR-EDInterPro annotationAdd BLAST184

Phylogenomic databases

eggNOGiENOG4105J4Q. Bacteria.
COG1414. LUCA.
OMAiMDNSSGV.

Family and domain databases

CDDicd00090. HTH_ARSR. 1 hit.
Gene3Di1.10.10.10. 1 hit.
3.30.450.40. 1 hit.
InterProiView protein in InterPro
IPR011991. ArsR-like_HTH.
IPR029016. GAF_dom-like.
IPR014757. Tscrpt_reg_IclR_C.
IPR005471. Tscrpt_reg_IclR_N.
IPR036388. WH-like_DNA-bd_sf.
IPR036390. WH_DNA-bd_sf.
PfamiView protein in Pfam
PF09339. HTH_IclR. 1 hit.
PF01614. IclR. 1 hit.
SMARTiView protein in SMART
SM00346. HTH_ICLR. 1 hit.
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF55781. SSF55781. 1 hit.
PROSITEiView protein in PROSITE
PS51077. HTH_ICLR. 1 hit.
PS51078. ICLR_ED. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9WXS0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNTLKKAFEI LDFIVKNPGD VSVSEIAEKF NMSVSNAYKY MVVLEEKGFV
60 70 80 90 100
LRKKDKRYVP GYKLIEYGSF VLRRFNIRDI AHDHLVDIMK RTGETVHLIL
110 120 130 140 150
KDGFEGVYID KVEGEQSIPM VSRLGMKVDL YSTASGKSIL AFVPEKELKE
160 170 180 190 200
YLKIVELKPK TPNTITNPRV LKRELEKIRK RGYAVDNEEN EIGIMCVGVP
210 220 230 240
IFDHNGYPVA GVSISGVARK FTEEKIEEYS DVLKEKAEEI SRKLGY
Length:246
Mass (Da):28,119
Last modified:November 1, 1999 - v1
Checksum:iAD68B31A05A27D91
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000512 Genomic DNA. Translation: AAD35159.1.
PIRiE72422.
RefSeqiNP_227881.1. NC_000853.1.
WP_004082558.1. NZ_CP011107.1.

Genome annotation databases

EnsemblBacteriaiAAD35159; AAD35159; TM_0065.
AGL48988; AGL48988; Tmari_0062.
GeneIDi896889.
KEGGitma:TM0065.
tmi:THEMA_04480.
tmw:THMA_0061.
PATRICifig|243274.17.peg.64.

Similar proteinsi

Entry informationi

Entry nameiQ9WXS0_THEMA
AccessioniPrimary (citable) accession number: Q9WXS0
Secondary accession number(s): G4FGY0
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1999
Last sequence update: November 1, 1999
Last modified: October 25, 2017
This is version 120 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported