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Protein
Submitted name:

Laminarinase

Gene

TM_0024

Organism
Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi219Calcium 1; via carbonyl oxygenCombined sources1
Metal bindingi221Calcium 1Combined sources1
Metal bindingi263Calcium 1; via carbonyl oxygenCombined sources1
Metal bindingi451Calcium 1Combined sources1
Metal bindingi493Calcium 2; via carbonyl oxygenCombined sources1
Metal bindingi532Calcium 2; via carbonyl oxygenCombined sources1
Metal bindingi635Calcium 2Combined sources1

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Keywords - Ligandi

CalciumCombined sources, Metal-bindingCombined sources

Protein family/group databases

CAZyiCBM4. Carbohydrate-Binding Module Family 4.
GH16. Glycoside Hydrolase Family 16.

Names & Taxonomyi

Protein namesi
Submitted name:
LaminarinaseImported (EC:3.2.1.39Imported)
Gene namesi
Ordered Locus Names:TM_0024Imported
ORF Names:Tmari_0021Imported
OrganismiThermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)Imported
Taxonomic identifieri243274 [NCBI]
Taxonomic lineageiBacteriaThermotogaeThermotogalesThermotogaceaeThermotoga
Proteomesi
  • UP000013901 Componenti: Chromosome
  • UP000008183 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi243274.TM0024.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1GUIX-ray1.90A489-642[»]
3AZXX-ray1.80A/B204-466[»]
3AZYX-ray1.65A/B/C/D204-466[»]
3AZZX-ray1.81A/B/C/D204-466[»]
3B00X-ray1.74A/B/C/D204-466[»]
3B01X-ray1.87A/B/C/D204-466[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini210 – 461GH16 (glycosyl hydrolase family 16)InterPro annotationAdd BLAST252

Phylogenomic databases

eggNOGiENOG4105FBU. Bacteria.
COG2273. LUCA.
OMAiRFEFQLG.

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
2.60.120.260. 2 hits.
InterProiIPR003305. CenC_carb-bd.
IPR013320. ConA-like_dom.
IPR008979. Galactose-bd-like.
IPR000757. GH16.
[Graphical view]
PfamiPF02018. CBM_4_9. 2 hits.
PF00722. Glyco_hydro_16. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 2 hits.
SSF49899. SSF49899. 1 hit.
PROSITEiPS51762. GH16_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9WXN1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMSRLVFALL LFPVFILAQN ILGNASFDEP ILIAGVDIDP PAEDGSIDTG
60 70 80 90 100
GNWVFFTNSN GEGTARVENG VLVVEITNGG DHTWSVQIIQ APIRVEKLHK
110 120 130 140 150
YRVSFRAKAS SQKNIGVKIG GTAGRGWTAY NPGTDESGGM VFELGTDWQK
160 170 180 190 200
YEFEFVMRQE TDENARFEFQ LGRYTGTVWI DDVVMEDIGV LEVSGEENEI
210 220 230 240 250
YTEEDEDKVE DWQLVWSQEF DDGVIDPNIW NFEIGNGHAK GIPGWGNGEL
260 270 280 290 300
EYYTDENAFV ENGCLVIEAR KEQVSDEYGT YDYTSARMTT EGKFEIKYGK
310 320 330 340 350
IEIRAKLPKG KGIWPALWML GNNIGEVGWP TCGEIDIMEM LGHDTRTVYG
360 370 380 390 400
TAHGPGYSGG ASIGVAYHLP EGVPDFSEDF HIFSIEWDED EVEWYVDGQL
410 420 430 440 450
YHVLSKDELA ELGLEWVFDH PFFLILNVAV GGYWPGYPDE TTQFPQRMYI
460 470 480 490 500
DYIRVYKDMN PETITGEVDD CEYEQAQQQA GPEVTYEQIN NGTFDEPIVN
510 520 530 540 550
DQANNPDEWF IWQAGDYGIS GARVSDYGVR DGYAYITIAD PGTDTWHIQF
560 570 580 590 600
NQWIGLYRGK TYTISFKAKA DTPRPINVKI LQNHDPWTNY FAQTVNLTAD
610 620 630 640
WQTFTFTYTH PDDADEVVQI SFELGEGTAT TIYFDDVTVS PQ
Length:642
Mass (Da):72,540
Last modified:November 1, 1999 - v1
Checksum:i6431C9825597BF7E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000512 Genomic DNA. Translation: AAD35118.1.
CP004077 Genomic DNA. Translation: AGL48947.1.
PIRiB72428.
RefSeqiNP_227840.1. NC_000853.1.
WP_010865031.1. NZ_CP011107.1.

Genome annotation databases

EnsemblBacteriaiAAD35118; AAD35118; TM_0024.
AGL48947; AGL48947; Tmari_0021.
GeneIDi896840.
KEGGitma:TM0024.
tmm:Tmari_0021.
tmw:THMA_0020.
PATRICi23934888. VBITheMar51294_0022.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000512 Genomic DNA. Translation: AAD35118.1.
CP004077 Genomic DNA. Translation: AGL48947.1.
PIRiB72428.
RefSeqiNP_227840.1. NC_000853.1.
WP_010865031.1. NZ_CP011107.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1GUIX-ray1.90A489-642[»]
3AZXX-ray1.80A/B204-466[»]
3AZYX-ray1.65A/B/C/D204-466[»]
3AZZX-ray1.81A/B/C/D204-466[»]
3B00X-ray1.74A/B/C/D204-466[»]
3B01X-ray1.87A/B/C/D204-466[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi243274.TM0024.

Protein family/group databases

CAZyiCBM4. Carbohydrate-Binding Module Family 4.
GH16. Glycoside Hydrolase Family 16.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAD35118; AAD35118; TM_0024.
AGL48947; AGL48947; Tmari_0021.
GeneIDi896840.
KEGGitma:TM0024.
tmm:Tmari_0021.
tmw:THMA_0020.
PATRICi23934888. VBITheMar51294_0022.

Phylogenomic databases

eggNOGiENOG4105FBU. Bacteria.
COG2273. LUCA.
OMAiRFEFQLG.

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
2.60.120.260. 2 hits.
InterProiIPR003305. CenC_carb-bd.
IPR013320. ConA-like_dom.
IPR008979. Galactose-bd-like.
IPR000757. GH16.
[Graphical view]
PfamiPF02018. CBM_4_9. 2 hits.
PF00722. Glyco_hydro_16. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 2 hits.
SSF49899. SSF49899. 1 hit.
PROSITEiPS51762. GH16_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ9WXN1_THEMA
AccessioniPrimary (citable) accession number: Q9WXN1
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1999
Last sequence update: November 1, 1999
Last modified: November 2, 2016
This is version 106 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.