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Q9WXF2

- RECN_DEIRA

UniProt

Q9WXF2 - RECN_DEIRA

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Protein
DNA repair protein RecN
Gene
recN, DR_1477
Organism
Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

May be involved in recombinational repair of damaged DNA By similarity.

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi61 – 688ATP Reviewed prediction

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

DNA damage, DNA repair

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciDRAD243230:GH46-1507-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
DNA repair protein RecN
Alternative name(s):
Recombination protein N
Gene namesi
Name:recN
Ordered Locus Names:DR_1477
OrganismiDeinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Taxonomic identifieri243230 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus
ProteomesiUP000002524: Chromosome I

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 564564DNA repair protein RecN
PRO_0000188016Add
BLAST

Interactioni

Protein-protein interaction databases

DIPiDIP-59988N.
STRINGi243230.DR_1477.

Structurei

Secondary structure

Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi36 – 427
Beta strandi45 – 517
Beta strandi54 – 629
Helixi63 – 708
Helixi72 – 776
Helixi84 – 863
Beta strandi92 – 998
Beta strandi110 – 1167
Beta strandi121 – 1255
Beta strandi128 – 1303
Helixi132 – 1398
Turni140 – 1423
Beta strandi143 – 1464
Turni147 – 1493
Turni151 – 1544
Helixi157 – 1659
Helixi169 – 19123
Helixi196 – 21621
Turni220 – 2223
Helixi223 – 25028
Beta strandi253 – 2553
Helixi257 – 27216
Helixi276 – 30429
Helixi310 – 33021
Helixi334 – 35825
Helixi365 – 39834
Turni399 – 4024
Beta strandi407 – 41913
Beta strandi422 – 43514
Helixi441 – 4433
Helixi447 – 46115
Beta strandi464 – 4729
Turni473 – 4764
Helixi479 – 49214
Turni493 – 4953
Beta strandi496 – 5016
Helixi505 – 5084
Beta strandi512 – 52211
Beta strandi525 – 5328
Helixi536 – 54712
Helixi552 – 56211

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4ABXX-ray2.04A/B/C/D196-364[»]
4ABYX-ray3.00A/B/C/D1-195[»]
A/B/C/D365-564[»]
4AD8X-ray4.00A1-237[»]
A305-564[»]
ProteinModelPortaliQ9WXF2.

Family & Domainsi

Sequence similaritiesi

Belongs to the RecN family.

Phylogenomic databases

eggNOGiCOG0497.
HOGENOMiHOG000009326.
KOiK03631.
OMAiHQLLSYQ.
OrthoDBiEOG6WQD34.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR004604. DNA_recomb/repair_RecN.
IPR027417. P-loop_NTPase.
IPR003395. RecF/RecN/SMC_N.
[Graphical view]
PANTHERiPTHR11059. PTHR11059. 1 hit.
PfamiPF02463. SMC_N. 1 hit.
[Graphical view]
PIRSFiPIRSF003128. RecN. 1 hit.
SUPFAMiSSF52540. SSF52540. 3 hits.
TIGRFAMsiTIGR00634. recN. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9WXF2-1 [UniParc]FASTAAdd to Basket

« Hide

MTRKARTPKA APVPEAVAVV EPPPPDAAPT GPRLSRLEIR NLATITQLEL    50
ELGGGFCAFT GETGAGKSII VDALGLLLGG RANHDLIRSG EKELLVTGFW 100
GDGDESEADS ASRRLSSAGR GAARLSGEVV SVRELQEWAQ GRLTIHWQHS 150
AVSLLSPANQ RGLLDRRVTK EAQAYAAAHA AWREAVSRLE RLQASQRERA 200
RQIDLLAFQV QEISEVSPDP GEEEGLNTEL SRLSNLHTIA QAAAGGVELL 250
SDGDLNAAGL IGEAVRALNA GAKYDETVMQ LQNELRAALE SVQAIAGELR 300
DVAEGSAADP EALDRVEARL SALSKLKNKY GPTLEDVVEF GAQAAEELAG 350
LEEDERDAGS LQADVDALHA ELLKVGQALD AAREREAEPL VDSLLAVIRE 400
LGMPHARMEF ALSALAEPAA YGLSDVLLRF SANPGEELGP LSDVASGGEL 450
SRVMLAVSTV LGADTPSVVF DEVDAGIGGA AAIAVAEQLS RLADTRQVLV 500
VTHLAQIAAR AHHHYKVEKQ VEDGRTVSHV RLLTGDERLE EIARMLSGNT 550
SEAALEHARE LLAG 564
Length:564
Mass (Da):59,799
Last modified:May 30, 2000 - v2
Checksum:iAA620A2C2F0F615F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB023411 Genomic DNA. Translation: BAA76704.1.
AE000513 Genomic DNA. Translation: AAF11043.1.
PIRiA75391.
RefSeqiNP_295200.1. NC_001263.1.
WP_010888116.1. NC_001263.1.

Genome annotation databases

EnsemblBacteriaiAAF11043; AAF11043; DR_1477.
GeneIDi1797679.
KEGGidra:DR_1477.
PATRICi21630561. VBIDeiRad64572_1677.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB023411 Genomic DNA. Translation: BAA76704.1 .
AE000513 Genomic DNA. Translation: AAF11043.1 .
PIRi A75391.
RefSeqi NP_295200.1. NC_001263.1.
WP_010888116.1. NC_001263.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4ABX X-ray 2.04 A/B/C/D 196-364 [» ]
4ABY X-ray 3.00 A/B/C/D 1-195 [» ]
A/B/C/D 365-564 [» ]
4AD8 X-ray 4.00 A 1-237 [» ]
A 305-564 [» ]
ProteinModelPortali Q9WXF2.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

DIPi DIP-59988N.
STRINGi 243230.DR_1477.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAF11043 ; AAF11043 ; DR_1477 .
GeneIDi 1797679.
KEGGi dra:DR_1477.
PATRICi 21630561. VBIDeiRad64572_1677.

Phylogenomic databases

eggNOGi COG0497.
HOGENOMi HOG000009326.
KOi K03631.
OMAi HQLLSYQ.
OrthoDBi EOG6WQD34.

Enzyme and pathway databases

BioCyci DRAD243230:GH46-1507-MONOMER.

Family and domain databases

Gene3Di 3.40.50.300. 2 hits.
InterProi IPR004604. DNA_recomb/repair_RecN.
IPR027417. P-loop_NTPase.
IPR003395. RecF/RecN/SMC_N.
[Graphical view ]
PANTHERi PTHR11059. PTHR11059. 1 hit.
Pfami PF02463. SMC_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF003128. RecN. 1 hit.
SUPFAMi SSF52540. SSF52540. 3 hits.
TIGRFAMsi TIGR00634. recN. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Deinococcus radiodurans recN gene: a molecular cloning and gene disruption analysis."
    Funayama T., Narumi I., Kikuchi M., Kitayama S., Watanabe H., Yamamoto K.
    Submitted (FEB-1999) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: KD8301.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422.

Entry informationi

Entry nameiRECN_DEIRA
AccessioniPrimary (citable) accession number: Q9WXF2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: May 30, 2000
Last modified: September 3, 2014
This is version 89 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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