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Q9WXF2

- RECN_DEIRA

UniProt

Q9WXF2 - RECN_DEIRA

Protein

DNA repair protein RecN

Gene

recN

Organism
Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 90 (01 Oct 2014)
      Sequence version 2 (30 May 2000)
      Previous versions | rss
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    Functioni

    May be involved in recombinational repair of damaged DNA.By similarity

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi61 – 688ATPSequence Analysis

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: UniProtKB-KW

    Keywords - Biological processi

    DNA damage, DNA repair

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciDRAD243230:GH46-1507-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA repair protein RecN
    Alternative name(s):
    Recombination protein N
    Gene namesi
    Name:recN
    Ordered Locus Names:DR_1477
    OrganismiDeinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
    Taxonomic identifieri243230 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciDeinococcalesDeinococcaceaeDeinococcus
    ProteomesiUP000002524: Chromosome I

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 564564DNA repair protein RecNPRO_0000188016Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    DIPiDIP-59988N.
    STRINGi243230.DR_1477.

    Structurei

    Secondary structure

    1
    564
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi36 – 427
    Beta strandi45 – 517
    Beta strandi54 – 629
    Helixi63 – 708
    Helixi72 – 776
    Helixi84 – 863
    Beta strandi92 – 998
    Beta strandi110 – 1167
    Beta strandi121 – 1255
    Beta strandi128 – 1303
    Helixi132 – 1398
    Turni140 – 1423
    Beta strandi143 – 1464
    Turni147 – 1493
    Turni151 – 1544
    Helixi157 – 1659
    Helixi169 – 19123
    Helixi196 – 21621
    Turni220 – 2223
    Helixi223 – 25028
    Beta strandi253 – 2553
    Helixi257 – 27216
    Helixi276 – 30429
    Helixi310 – 33021
    Helixi334 – 35825
    Helixi365 – 39834
    Turni399 – 4024
    Beta strandi407 – 41913
    Beta strandi422 – 43514
    Helixi441 – 4433
    Helixi447 – 46115
    Beta strandi464 – 4729
    Turni473 – 4764
    Helixi479 – 49214
    Turni493 – 4953
    Beta strandi496 – 5016
    Helixi505 – 5084
    Beta strandi512 – 52211
    Beta strandi525 – 5328
    Helixi536 – 54712
    Helixi552 – 56211

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4ABXX-ray2.04A/B/C/D196-364[»]
    4ABYX-ray3.00A/B/C/D1-195[»]
    A/B/C/D365-564[»]
    4AD8X-ray4.00A1-237[»]
    A305-564[»]
    ProteinModelPortaliQ9WXF2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the RecN family.Curated

    Phylogenomic databases

    eggNOGiCOG0497.
    HOGENOMiHOG000009326.
    KOiK03631.
    OMAiHQLLSYQ.
    OrthoDBiEOG6WQD34.

    Family and domain databases

    Gene3Di3.40.50.300. 2 hits.
    InterProiIPR004604. DNA_recomb/repair_RecN.
    IPR027417. P-loop_NTPase.
    IPR003395. RecF/RecN/SMC_N.
    [Graphical view]
    PANTHERiPTHR11059. PTHR11059. 1 hit.
    PfamiPF02463. SMC_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF003128. RecN. 1 hit.
    SUPFAMiSSF52540. SSF52540. 3 hits.
    TIGRFAMsiTIGR00634. recN. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q9WXF2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTRKARTPKA APVPEAVAVV EPPPPDAAPT GPRLSRLEIR NLATITQLEL    50
    ELGGGFCAFT GETGAGKSII VDALGLLLGG RANHDLIRSG EKELLVTGFW 100
    GDGDESEADS ASRRLSSAGR GAARLSGEVV SVRELQEWAQ GRLTIHWQHS 150
    AVSLLSPANQ RGLLDRRVTK EAQAYAAAHA AWREAVSRLE RLQASQRERA 200
    RQIDLLAFQV QEISEVSPDP GEEEGLNTEL SRLSNLHTIA QAAAGGVELL 250
    SDGDLNAAGL IGEAVRALNA GAKYDETVMQ LQNELRAALE SVQAIAGELR 300
    DVAEGSAADP EALDRVEARL SALSKLKNKY GPTLEDVVEF GAQAAEELAG 350
    LEEDERDAGS LQADVDALHA ELLKVGQALD AAREREAEPL VDSLLAVIRE 400
    LGMPHARMEF ALSALAEPAA YGLSDVLLRF SANPGEELGP LSDVASGGEL 450
    SRVMLAVSTV LGADTPSVVF DEVDAGIGGA AAIAVAEQLS RLADTRQVLV 500
    VTHLAQIAAR AHHHYKVEKQ VEDGRTVSHV RLLTGDERLE EIARMLSGNT 550
    SEAALEHARE LLAG 564
    Length:564
    Mass (Da):59,799
    Last modified:May 30, 2000 - v2
    Checksum:iAA620A2C2F0F615F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB023411 Genomic DNA. Translation: BAA76704.1.
    AE000513 Genomic DNA. Translation: AAF11043.1.
    PIRiA75391.
    RefSeqiNP_295200.1. NC_001263.1.
    WP_010888116.1. NC_001263.1.

    Genome annotation databases

    EnsemblBacteriaiAAF11043; AAF11043; DR_1477.
    GeneIDi1797679.
    KEGGidra:DR_1477.
    PATRICi21630561. VBIDeiRad64572_1677.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB023411 Genomic DNA. Translation: BAA76704.1 .
    AE000513 Genomic DNA. Translation: AAF11043.1 .
    PIRi A75391.
    RefSeqi NP_295200.1. NC_001263.1.
    WP_010888116.1. NC_001263.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4ABX X-ray 2.04 A/B/C/D 196-364 [» ]
    4ABY X-ray 3.00 A/B/C/D 1-195 [» ]
    A/B/C/D 365-564 [» ]
    4AD8 X-ray 4.00 A 1-237 [» ]
    A 305-564 [» ]
    ProteinModelPortali Q9WXF2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    DIPi DIP-59988N.
    STRINGi 243230.DR_1477.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAF11043 ; AAF11043 ; DR_1477 .
    GeneIDi 1797679.
    KEGGi dra:DR_1477.
    PATRICi 21630561. VBIDeiRad64572_1677.

    Phylogenomic databases

    eggNOGi COG0497.
    HOGENOMi HOG000009326.
    KOi K03631.
    OMAi HQLLSYQ.
    OrthoDBi EOG6WQD34.

    Enzyme and pathway databases

    BioCyci DRAD243230:GH46-1507-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.300. 2 hits.
    InterProi IPR004604. DNA_recomb/repair_RecN.
    IPR027417. P-loop_NTPase.
    IPR003395. RecF/RecN/SMC_N.
    [Graphical view ]
    PANTHERi PTHR11059. PTHR11059. 1 hit.
    Pfami PF02463. SMC_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF003128. RecN. 1 hit.
    SUPFAMi SSF52540. SSF52540. 3 hits.
    TIGRFAMsi TIGR00634. recN. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Deinococcus radiodurans recN gene: a molecular cloning and gene disruption analysis."
      Funayama T., Narumi I., Kikuchi M., Kitayama S., Watanabe H., Yamamoto K.
      Submitted (FEB-1999) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: KD8301.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422.

    Entry informationi

    Entry nameiRECN_DEIRA
    AccessioniPrimary (citable) accession number: Q9WXF2
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 30, 2000
    Last sequence update: May 30, 2000
    Last modified: October 1, 2014
    This is version 90 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Reference proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3