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Q9WXF2 (RECN_DEIRA) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 80. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
DNA repair protein RecN
Alternative name(s):
Recombination protein N
Gene names
Name:recN
Ordered Locus Names:DR_1477
OrganismDeinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) [Reference proteome] [HAMAP]
Taxonomic identifier243230 [NCBI]
Taxonomic lineageBacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus ›

Protein attributes

Sequence length564 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

May be involved in recombinational repair of damaged DNA By similarity.

Sequence similarities

Belongs to the RecN family.

Ontologies

Keywords
   Biological processDNA damage
DNA repair
   LigandATP-binding
Nucleotide-binding
   Technical term3D-structure
Complete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 564564DNA repair protein RecN
PRO_0000188016

Regions

Nucleotide binding61 – 688ATP Potential

Secondary structure

1 .......................................................................... 564
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
Q9WXF2 [UniParc].

Last modified May 30, 2000. Version 2.
Checksum: AA620A2C2F0F615F

FASTA56459,799
        10         20         30         40         50         60 
MTRKARTPKA APVPEAVAVV EPPPPDAAPT GPRLSRLEIR NLATITQLEL ELGGGFCAFT 

        70         80         90        100        110        120 
GETGAGKSII VDALGLLLGG RANHDLIRSG EKELLVTGFW GDGDESEADS ASRRLSSAGR 

       130        140        150        160        170        180 
GAARLSGEVV SVRELQEWAQ GRLTIHWQHS AVSLLSPANQ RGLLDRRVTK EAQAYAAAHA 

       190        200        210        220        230        240 
AWREAVSRLE RLQASQRERA RQIDLLAFQV QEISEVSPDP GEEEGLNTEL SRLSNLHTIA 

       250        260        270        280        290        300 
QAAAGGVELL SDGDLNAAGL IGEAVRALNA GAKYDETVMQ LQNELRAALE SVQAIAGELR 

       310        320        330        340        350        360 
DVAEGSAADP EALDRVEARL SALSKLKNKY GPTLEDVVEF GAQAAEELAG LEEDERDAGS 

       370        380        390        400        410        420 
LQADVDALHA ELLKVGQALD AAREREAEPL VDSLLAVIRE LGMPHARMEF ALSALAEPAA 

       430        440        450        460        470        480 
YGLSDVLLRF SANPGEELGP LSDVASGGEL SRVMLAVSTV LGADTPSVVF DEVDAGIGGA 

       490        500        510        520        530        540 
AAIAVAEQLS RLADTRQVLV VTHLAQIAAR AHHHYKVEKQ VEDGRTVSHV RLLTGDERLE 

       550        560 
EIARMLSGNT SEAALEHARE LLAG

« Hide

References

« Hide 'large scale' references
[1]"Deinococcus radiodurans recN gene: a molecular cloning and gene disruption analysis."
Funayama T., Narumi I., Kikuchi M., Kitayama S., Watanabe H., Yamamoto K.
Submitted (FEB-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: KD8301.
[2]"Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1."
White O., Eisen J.A., Heidelberg J.F., Hickey E.K., Peterson J.D., Dodson R.J., Haft D.H., Gwinn M.L., Nelson W.C., Richardson D.L., Moffat K.S., Qin H., Jiang L., Pamphile W., Crosby M., Shen M., Vamathevan J.J., Lam P. expand/collapse author list , McDonald L.A., Utterback T.R., Zalewski C., Makarova K.S., Aravind L., Daly M.J., Minton K.W., Fleischmann R.D., Ketchum K.A., Nelson K.E., Salzberg S.L., Smith H.O., Venter J.C., Fraser C.M.
Science 286:1571-1577(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AB023411 Genomic DNA. Translation: BAA76704.1.
AE000513 Genomic DNA. Translation: AAF11043.1.
PIRA75391.
RefSeqNP_295200.1. NC_001263.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4ABXX-ray2.04A/B/C/D196-364[»]
4ABYX-ray3.00A/B/C/D1-564[»]
4AD8X-ray4.00A1-564[»]
ProteinModelPortalQ9WXF2.
ModBaseSearch...

Protein-protein interaction databases

STRING243230.DR_1477.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAF11043; AAF11043; DR_1477.
GeneID1797679.
KEGGdra:DR_1477.
PATRIC21630561. VBIDeiRad64572_1677.

Phylogenomic databases

eggNOGCOG0497.
HOGENOMHOG000009326.
KOK03631.
OMANPGTRPG.
ProtClustDBCLSK497042.

Enzyme and pathway databases

BioCycDRAD243230:GH46-1846-MONOMER.

Family and domain databases

InterProIPR004604. DNA_recomb/repair_RecN.
IPR003395. RecF/RecN/SMC.
[Graphical view]
PANTHERPTHR11059. PTHR11059. 1 hit.
PfamPF02463. SMC_N. 1 hit.
[Graphical view]
PIRSFPIRSF003128. RecN. 1 hit.
TIGRFAMsTIGR00634. recN. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRECN_DEIRA
AccessionPrimary (citable) accession number: Q9WXF2
Entry history
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: May 30, 2000
Last modified: May 1, 2013
This is version 80 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

SIMILARITY comments

Index of protein domains and families

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