Q9WUW2 (Q9WUW2_RAT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Vesicle associated membrane protein 2B EMBL CAB43509.1

Gene names

Name:	Vamp2 RGD 3949
Synonyms:	vamp2 EMBL CAB43509.1

Organism

Rattus norvegicus (Rat) EMBL CAB43509.1

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	135 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 v-SNARE coiled-coil homology domain. SAAS SAAS001388

Ontologies

Keywords
Domain	Coiled coil SAAS SAAS001388
Gene Ontology (GO)
Biological process	vesicle-mediated transport Inferred from electronic annotation. Source: InterPro
Cellular component	integral to membrane Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9WUW2 [UniParc]. Last modified November 1, 1999. Version 1. Checksum: F37D14A87BDAB1F6	FASTA	135	14,509
	10 20 30 40 50 60 MSATAATVPP AAPAGEGGPP APPPNLTSNR RLQQTQAQVD EVVDIMRVNV DKVLERDQKL 70 80 90 100 110 120 SELDDRADAL QAGASQFETS AAKLKRKYWW KNLKMMIILG VICAIILIII IGEWSRSGQG 130 PFPGEVEGFP VGSGL

References

[1]	"Characterization of an alternatively spliced isoform of rat vesicle associated membrane protein-2 (VAMP-2)." Mandic R., Lowe A.W. FEBS Lett. 451:209-213(1999) [PubMed: 10371166] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Sprague-Dawley EMBL CAB43509.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AJ133104 mRNA. Translation: CAB43509.1.
IPI	IPI00204447.
UniGene	Rn.12939.
3D structure databases
HSSP	HSSP built from PDB template 1L4A based on UniProtKB P47194.
ProteinModelPortal	Q9WUW2.
SMR	Q9WUW2. Positions 25-93.
ModBase	Search...
Protein-protein interaction databases
STRING	Q9WUW2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
UCSC	AJ133104. rat.
Organism-specific databases
RGD	3949. Vamp2.
Phylogenomic databases
GeneTree	ENSGT00550000074449.
HOVERGEN	HBG079010.
InParanoid	Q9WUW2.
PhylomeDB	Q9WUW2.
Gene expression databases
ArrayExpress	Q9WUW2.
Genevestigator	Q9WUW2.
Family and domain databases
InterPro	IPR001388. Synaptobrevin. IPR016444. Synaptobrevin_met/fun. [Graphical view]
Pfam	PF00957. Synaptobrevin. 1 hit. [Graphical view]
PIRSF	PIRSF005409. Synaptobrevin_euk. 1 hit.
PRINTS	PR00219. SYNAPTOBREVN.
PROSITE	PS00417. SYNAPTOBREVIN. 1 hit. PS50892. V_SNARE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9WUW2_RAT

Accession

Primary (citable) accession number: Q9WUW2

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1999
Last sequence update:	November 1, 1999
Last modified:	November 16, 2011
This is version 53 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)