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Protein

Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3

Gene

St6galnac3

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at transcript leveli

Functioni

Involved in the biosynthesis of ganglioside GD1A from GM1B. Transfers CMP-NeuAc with an alpha-2,6-linkage to GalNAc residue on NeuAc-alpha-2,3-Gal-beta-1,3-GalNAc of glycoproteins and glycolipids. ST6GalNAcIII prefers glycolipids to glycoproteins.1 Publication

Catalytic activityi

CMP-N-acetylneuraminate + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,3-(N-acetyl-D-galactosaminyl)-glycoprotein = CMP + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-(2,6-alpha-N-acetylneuraminyl)-(N-acetyl-D-galactosaminyl)-glycoprotein.

Pathwayi: protein glycosylation

This protein is involved in the pathway protein glycosylation, which is part of Protein modification.
View all proteins of this organism that are known to be involved in the pathway protein glycosylation and in Protein modification.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Enzyme and pathway databases

ReactomeiR-MMU-4085001. Sialic acid metabolism.
UniPathwayiUPA00378.

Protein family/group databases

CAZyiGT29. Glycosyltransferase Family 29.

Chemistry

SwissLipidsiSLP:000000783.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 (EC:2.4.99.-)
Alternative name(s):
GalNAc alpha-2,6-sialyltransferase III
ST6GalNAc III
Short name:
ST6GalNAcIII
STY
Sialyltransferase 7C
Short name:
SIAT7-C
Gene namesi
Name:St6galnac3
Synonyms:Siat7c
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 3

Organism-specific databases

MGIiMGI:1341828. St6galnac3.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 88CytoplasmicSequence analysis
Transmembranei9 – 2820Helical; Signal-anchor for type II membrane proteinSequence analysisAdd
BLAST
Topological domaini29 – 305277LumenalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Golgi apparatus, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 305305Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3PRO_0000149276Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi80 ↔ 229By similarity
Glycosylationi239 – 2391N-linked (GlcNAc...)Sequence analysis
Glycosylationi301 – 3011N-linked (GlcNAc...)Sequence analysis

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

MaxQBiQ9WUV2.
PaxDbiQ9WUV2.
PRIDEiQ9WUV2.

PTM databases

PhosphoSiteiQ9WUV2.

Expressioni

Tissue specificityi

High expression in brain, lung and heart and to a lesser extent in kidney, mammary gland, spleen, testis and thymus.1 Publication

Developmental stagei

In brain, expression reaches maximum levels at day 12 of the embryonic stage. Keeps almost similar levels during mouse development.1 Publication

Gene expression databases

BgeeiQ9WUV2.
ExpressionAtlasiQ9WUV2. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000068598.

Structurei

3D structure databases

ProteinModelPortaliQ9WUV2.
SMRiQ9WUV2. Positions 75-236.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 29 family.Curated

Keywords - Domaini

Signal-anchor, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG2692. Eukaryota.
ENOG410XT8P. LUCA.
GeneTreeiENSGT00550000074444.
HOGENOMiHOG000293316.
HOVERGENiHBG058710.
InParanoidiQ9WUV2.
KOiK03373.
OMAiHENAPYG.
OrthoDBiEOG78SQJV.
PhylomeDBiQ9WUV2.
TreeFamiTF352818.

Family and domain databases

InterProiIPR001675. Glyco_trans_29.
[Graphical view]
PfamiPF00777. Glyco_transf_29. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9WUV2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MACILKRKPV LVVSFIALCI LLLAMRLVND ATFPLLLNCF GQPKTKWIPL
60 70 80 90 100
PYTFRQPLRT HYGYINVRTQ EPLQLNCNHC AIVSNSGQMV GQKVGEEIDH
110 120 130 140 150
ASCIWRMNNA PTKGFEEDVG YMTMVRVVSH TSVPLLLKNP DYFFKEASRT
160 170 180 190 200
IYVIWGPFRN MRKDGNGIVY NMLKKTVDAY PDAQIYVTTE QQMTHCDRVF
210 220 230 240 250
KDETGKDRVQ SGSYLSTGWF TFILAMDACY SIHVYGMINE TYCKTEGYRK
260 270 280 290 300
VPYHYYEQGK DECNEYLLHE HAPYGGHRFI TEKKVFAKWA KKHRIVFTHP

NWTLS
Length:305
Mass (Da):35,414
Last modified:March 1, 2001 - v2
Checksum:i63C7498615BF6A3F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y11342 mRNA. Translation: CAA72181.2.
Y11343
, Y11344, Y11345, Y11346 Genomic DNA. Translation: CAB95031.1.
BC058387 mRNA. Translation: AAH58387.1.
CCDSiCCDS38677.1.
RefSeqiNP_035502.1. NM_011372.2.
UniGeneiMm.296453.
Mm.440929.

Genome annotation databases

EnsembliENSMUST00000200397; ENSMUSP00000143747; ENSMUSG00000052544.
GeneIDi20447.
KEGGimmu:20447.
UCSCiuc008rtw.1. mouse.

Cross-referencesi

Web resourcesi

Functional Glycomics Gateway - GTase

ST6GalNAc III

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y11342 mRNA. Translation: CAA72181.2.
Y11343
, Y11344, Y11345, Y11346 Genomic DNA. Translation: CAB95031.1.
BC058387 mRNA. Translation: AAH58387.1.
CCDSiCCDS38677.1.
RefSeqiNP_035502.1. NM_011372.2.
UniGeneiMm.296453.
Mm.440929.

3D structure databases

ProteinModelPortaliQ9WUV2.
SMRiQ9WUV2. Positions 75-236.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000068598.

Chemistry

SwissLipidsiSLP:000000783.

Protein family/group databases

CAZyiGT29. Glycosyltransferase Family 29.

PTM databases

PhosphoSiteiQ9WUV2.

Proteomic databases

MaxQBiQ9WUV2.
PaxDbiQ9WUV2.
PRIDEiQ9WUV2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000200397; ENSMUSP00000143747; ENSMUSG00000052544.
GeneIDi20447.
KEGGimmu:20447.
UCSCiuc008rtw.1. mouse.

Organism-specific databases

CTDi256435.
MGIiMGI:1341828. St6galnac3.

Phylogenomic databases

eggNOGiKOG2692. Eukaryota.
ENOG410XT8P. LUCA.
GeneTreeiENSGT00550000074444.
HOGENOMiHOG000293316.
HOVERGENiHBG058710.
InParanoidiQ9WUV2.
KOiK03373.
OMAiHENAPYG.
OrthoDBiEOG78SQJV.
PhylomeDBiQ9WUV2.
TreeFamiTF352818.

Enzyme and pathway databases

UniPathwayiUPA00378.
ReactomeiR-MMU-4085001. Sialic acid metabolism.

Miscellaneous databases

NextBioi298506.
PROiQ9WUV2.
SOURCEiSearch...

Gene expression databases

BgeeiQ9WUV2.
ExpressionAtlasiQ9WUV2. baseline and differential.

Family and domain databases

InterProiIPR001675. Glyco_trans_29.
[Graphical view]
PfamiPF00777. Glyco_transf_29. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Molecular cloning and functional expression of two members of mouse NeuAc-alpha-2,3Gal-beta-1,3GalNAc GalNAc-alpha2,6-sialyltransferase family, ST6GalNAc III and IV."
    Lee Y.-C., Kaufman M., Kitazume-Kawaguchi S., Kono M., Takashima S., Kurosawa N., Liu H., Pircher H., Tsuji S.
    J. Biol. Chem. 274:11958-11967(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, TISSUE SPECIFICITY, DEVELOPMENTAL STAGE.
    Strain: ICR.
    Tissue: Brain.
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6J.
    Tissue: Brain.

Entry informationi

Entry nameiSIA7C_MOUSE
AccessioniPrimary (citable) accession number: Q9WUV2
Secondary accession number(s): Q9JHP5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 11, 2002
Last sequence update: March 1, 2001
Last modified: May 11, 2016
This is version 108 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.