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Protein

SNRPN upstream reading frame protein

Gene

Snurf

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Miscellaneous

Encoded on a bicistronic transcript that code for two proteins, SNRPN and SNURF. Only the primary 1.6-kb bicistronic SNURF-SNRPN transcript is detected.

GO - Molecular functioni

  • ATPase binding Source: MGI

Names & Taxonomyi

Protein namesi
Recommended name:
SNRPN upstream reading frame protein
Gene namesi
Name:Snurf
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 7

Organism-specific databases

MGIiMGI:1891236 Snurf

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003129941 – 71SNRPN upstream reading frame proteinAdd BLAST71

Proteomic databases

PaxDbiQ9WU12
PRIDEiQ9WU12

PTM databases

iPTMnetiQ9WU12
PhosphoSitePlusiQ9WU12

Expressioni

Tissue specificityi

Expressed in brain and embryonic stem (ES) cells (at protein level). Expressed in the brain, ovary, testis, liver, heart, kidney and muscle.2 Publications

Gene expression databases

BgeeiENSMUSG00000000948
ExpressionAtlasiQ9WU12 baseline and differential
GenevisibleiQ9WU12 MM

Interactioni

GO - Molecular functioni

  • ATPase binding Source: MGI

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000136053

Family & Domainsi

Sequence similaritiesi

Belongs to the SNURF family.Curated

Phylogenomic databases

eggNOGiENOG410J0MJ Eukaryota
ENOG41115Q9 LUCA
GeneTreeiENSGT00390000009320
HOGENOMiHOG000154361
HOVERGENiHBG098497
InParanoidiQ9WU12
OMAiCHLYPRR
OrthoDBiEOG091G150Y
TreeFamiTF338383

Family and domain databases

InterProiView protein in InterPro
IPR009847 SNURF
PANTHERiPTHR14508 PTHR14508, 1 hit
PfamiView protein in Pfam
PF07192 SNURF, 1 hit

Sequencei

Sequence statusi: Complete.

Q9WU12-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MERGRDRLHL RRTTEQHVPE VEVQVKRRRT ASLSNQECHL YPRRSQQQQV
60 70
PVVDFQAELR QAFLAETPRG G
Length:71
Mass (Da):8,407
Last modified:November 1, 1999 - v1
Checksum:i89BEEFAA81D3076C
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti2 – 4ERG → QQP in AAK77667 (PubMed:11431693).Curated3

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF101042 mRNA Translation: AAD31389.1
AF332579 Genomic DNA Translation: AAK77666.1
AF332579 Genomic DNA Translation: AAK77667.1
BC132082 mRNA Translation: AAI32083.1
BC132084 mRNA Translation: AAI32085.1
CCDSiCCDS57553.1
RefSeqiNP_149409.1, NM_033174.3
UniGeneiMm.274995

Genome annotation databases

EnsembliENSMUST00000179360; ENSMUSP00000136053; ENSMUSG00000000948
ENSMUST00000194059; ENSMUSP00000141531; ENSMUSG00000102627
GeneIDi84704
KEGGimmu:84704

Similar proteinsi

Entry informationi

Entry nameiSNURF_MOUSE
AccessioniPrimary (citable) accession number: Q9WU12
Secondary accession number(s): Q924D8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: November 1, 1999
Last modified: February 28, 2018
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome