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Protein

SNRPN upstream reading frame protein

Gene

Snurf

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Miscellaneous

Encoded on a bicistronic transcript that code for two proteins, SNRPN and SNURF.

Names & Taxonomyi

Protein namesi
Recommended name:
SNRPN upstream reading frame protein
Gene namesi
Name:Snurf
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi69269. Snurf.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003129971 – 71SNRPN upstream reading frame proteinAdd BLAST71

Proteomic databases

PaxDbiQ9WU11.

Expressioni

Gene expression databases

BgeeiENSRNOG00000054391.
GenevisibleiQ9WU11. RN.

Interactioni

Protein-protein interaction databases

BioGridi250228. 2 interactors.
STRINGi10116.ENSRNOP00000030887.

Family & Domainsi

Sequence similaritiesi

Belongs to the SNURF family.Curated

Phylogenomic databases

eggNOGiENOG410J0MJ. Eukaryota.
ENOG41115Q9. LUCA.
GeneTreeiENSGT00390000009320.
HOGENOMiHOG000154361.
HOVERGENiHBG098497.
InParanoidiQ9WU11.
OMAiCHLYPRR.
OrthoDBiEOG091G150Y.
PhylomeDBiQ9WU11.

Family and domain databases

InterProiView protein in InterPro
IPR009847. SNURF.
PANTHERiPTHR14508. PTHR14508. 1 hit.
PfamiView protein in Pfam
PF07192. SNURF. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9WU11-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MERGRDRLHL RRTTEQHVPE IEVQVKRRRT ASLSNQECHL YPRRSQQQQI
60 70
PVVDFQAELR QAFLAETPRG G
Length:71
Mass (Da):8,436
Last modified:November 1, 1999 - v1
Checksum:i89BEF8A1EC64BBBC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF101041 mRNA. Translation: AAD31388.1.
RefSeqiNP_001257641.1. NM_001270712.1.
NP_570094.1. NM_130738.2.
UniGeneiRn.11169.
Rn.146833.
Rn.233755.

Genome annotation databases

EnsembliENSRNOT00000088874; ENSRNOP00000071994; ENSRNOG00000054391.
GeneIDi113938.
KEGGirno:113938.
UCSCiRGD:69269. rat.

Similar proteinsi

Entry informationi

Entry nameiSNURF_RAT
AccessioniPrimary (citable) accession number: Q9WU11
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: November 1, 1999
Last modified: August 30, 2017
This is version 69 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families