Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

SNRPN upstream reading frame protein

Gene

Snurf

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
SNRPN upstream reading frame protein
Gene namesi
Name:Snurf
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi69269. Snurf.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003129971 – 71SNRPN upstream reading frame proteinAdd BLAST71

Proteomic databases

PaxDbiQ9WU11.

Expressioni

Gene expression databases

GenevisibleiQ9WU11. RN.

Interactioni

Protein-protein interaction databases

BioGridi250228. 2 interactors.
STRINGi10116.ENSRNOP00000030887.

Family & Domainsi

Sequence similaritiesi

Belongs to the SNURF family.Curated

Phylogenomic databases

eggNOGiENOG410J0MJ. Eukaryota.
ENOG41115Q9. LUCA.
GeneTreeiENSGT00390000009320.
HOGENOMiHOG000154361.
HOVERGENiHBG098497.
InParanoidiQ9WU11.
OMAiCHLYPRR.
OrthoDBiEOG091G150Y.
PhylomeDBiQ9WU11.

Family and domain databases

InterProiIPR009847. SNURF.
[Graphical view]
PfamiPF07192. SNURF. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9WU11-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MERGRDRLHL RRTTEQHVPE IEVQVKRRRT ASLSNQECHL YPRRSQQQQI
60 70
PVVDFQAELR QAFLAETPRG G
Length:71
Mass (Da):8,436
Last modified:November 1, 1999 - v1
Checksum:i89BEF8A1EC64BBBC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF101041 mRNA. Translation: AAD31388.1.
RefSeqiNP_001257641.1. NM_001270712.1.
NP_570094.1. NM_130738.2.
UniGeneiRn.11169.
Rn.146833.
Rn.233755.

Genome annotation databases

EnsembliENSRNOT00000088874; ENSRNOP00000071994; ENSRNOG00000054391.
GeneIDi113938.
KEGGirno:113938.
UCSCiRGD:69269. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF101041 mRNA. Translation: AAD31388.1.
RefSeqiNP_001257641.1. NM_001270712.1.
NP_570094.1. NM_130738.2.
UniGeneiRn.11169.
Rn.146833.
Rn.233755.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi250228. 2 interactors.
STRINGi10116.ENSRNOP00000030887.

Proteomic databases

PaxDbiQ9WU11.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000088874; ENSRNOP00000071994; ENSRNOG00000054391.
GeneIDi113938.
KEGGirno:113938.
UCSCiRGD:69269. rat.

Organism-specific databases

CTDi8926.
RGDi69269. Snurf.

Phylogenomic databases

eggNOGiENOG410J0MJ. Eukaryota.
ENOG41115Q9. LUCA.
GeneTreeiENSGT00390000009320.
HOGENOMiHOG000154361.
HOVERGENiHBG098497.
InParanoidiQ9WU11.
OMAiCHLYPRR.
OrthoDBiEOG091G150Y.
PhylomeDBiQ9WU11.

Miscellaneous databases

PROiQ9WU11.

Gene expression databases

GenevisibleiQ9WU11. RN.

Family and domain databases

InterProiIPR009847. SNURF.
[Graphical view]
PfamiPF07192. SNURF. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiSNURF_RAT
AccessioniPrimary (citable) accession number: Q9WU11
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: November 1, 1999
Last modified: September 7, 2016
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Miscellaneous

Encoded on a bicistronic transcript that code for two proteins, SNRPN and SNURF.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.