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Protein
Submitted name:

G protein-coupled receptor

Gene

Gpr55

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

ReceptorImported

Names & Taxonomyi

Protein namesi
Submitted name:
G protein-coupled receptorImported
Gene namesi
Name:Gpr55Imported
Synonyms:GPR55Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi1559828. Gpr55.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei26 – 51HelicalSequence analysisAdd BLAST26
Transmembranei63 – 81HelicalSequence analysisAdd BLAST19
Transmembranei93 – 120HelicalSequence analysisAdd BLAST28
Transmembranei141 – 160HelicalSequence analysisAdd BLAST20
Transmembranei180 – 205HelicalSequence analysisAdd BLAST26
Transmembranei226 – 251HelicalSequence analysisAdd BLAST26
Transmembranei271 – 294HelicalSequence analysisAdd BLAST24

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiQ9WU09.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000023548.

Structurei

3D structure databases

ProteinModelPortaliQ9WU09.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini39 – 291G_PROTEIN_RECEP_F1_2InterPro annotationAdd BLAST253

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IEJJ. Eukaryota.
ENOG4111H9D. LUCA.
HOGENOMiHOG000013155.
HOVERGENiHBG096388.
PhylomeDBiQ9WU09.

Family and domain databases

InterProiIPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR028334. GPR55.
[Graphical view]
PANTHERiPTHR24232:SF56. PTHR24232:SF56. 1 hit.
PfamiPF00001. 7tm_1. 1 hit.
[Graphical view]
PRINTSiPR00237. GPCRRHODOPSN.
PROSITEiPS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q9WU09-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
TPTLSQLDSN NCSFVFVDNL RKTLQLAVHI PTFLLGLVLN LLAIRGFGAF
60 70 80 90 100
LKRRQLEYMA TSIYMINLAC FDLLLVLSLP FKMILPQVKS SPSLVFCTFV
110 120 130 140 150
ECLYFISMYG SVFTICFISL DRLLAIQYPL LVNHFRSPRK TFGICCIIWM
160 170 180 190 200
LVWVGSIPIY TFHRGVEGYK CFHNMSDSTW SARVFFPLEI FGFLLPMGIM
210 220 230 240 250
GFCSYRSIHI LLSIQGDDQW VRKRACIIWT IATNLVVFVV SFLPVHLGLF
260 270 280 290
LQFLVRNGFI LNCRVKQGIS LFLQLSLCFS NINCCLDVFC YYFAIK
Length:296
Mass (Da):34,009
Last modified:November 1, 1999 - v1
Checksum:i7D7A99596C21A030
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei296Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF100789 Genomic DNA. Translation: AAD22411.1.

Genome annotation databases

UCSCiRGD:1559828. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF100789 Genomic DNA. Translation: AAD22411.1.

3D structure databases

ProteinModelPortaliQ9WU09.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000023548.

Proteomic databases

PaxDbiQ9WU09.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

UCSCiRGD:1559828. rat.

Organism-specific databases

RGDi1559828. Gpr55.

Phylogenomic databases

eggNOGiENOG410IEJJ. Eukaryota.
ENOG4111H9D. LUCA.
HOGENOMiHOG000013155.
HOVERGENiHBG096388.
PhylomeDBiQ9WU09.

Family and domain databases

InterProiIPR000276. GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_7TM.
IPR028334. GPR55.
[Graphical view]
PANTHERiPTHR24232:SF56. PTHR24232:SF56. 1 hit.
PfamiPF00001. 7tm_1. 1 hit.
[Graphical view]
PRINTSiPR00237. GPCRRHODOPSN.
PROSITEiPS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ9WU09_RAT
AccessioniPrimary (citable) accession number: Q9WU09
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1999
Last sequence update: November 1, 1999
Last modified: October 5, 2016
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.