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Protein

Capsid protein

Gene

ORF1

Organism
Torque teno virus (isolate Human/Japan/SANBAN/1999) (TTV)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Self assemble to form an icosahedral capsid.By similarity

Names & Taxonomyi

Protein namesi
Recommended name:
Capsid protein
Gene namesi
ORF Names:ORF1
OrganismiTorque teno virus (isolate Human/Japan/SANBAN/1999) (TTV)
Taxonomic identifieri486277 [NCBI]
Taxonomic lineageiVirusesssDNA virusesAnelloviridaeunclassified Anelloviridae
Virus hostiHomo sapiens (Human) [TaxID: 9606]
Proteomesi
  • UP000008259 Componenti: Genome

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Capsid protein, T=1 icosahedral capsid protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003153301 – 745Capsid proteinAdd BLAST745

Proteomic databases

PRIDEiQ9WSV7

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi7 – 90Arg-richAdd BLAST84

Sequence similaritiesi

Phylogenomic databases

OrthoDBiVOG0900003O

Family and domain databases

InterProiView protein in InterPro
IPR004219 TTvirus_Unk
PfamiView protein in Pfam
PF02956 TT_ORF1, 1 hit

Sequencei

Sequence statusi: Complete.

Q9WSV7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAWGWWRRWR RWPARRWRRR RRRRPLRRRR AGRPARRYRR RRTVRTRRRR
60 70 80 90 100
WGRRRYRRGW RRRTYVRKGR HRKKKKRLIL RQWQPATRRR CTITGYLPIV
110 120 130 140 150
FCGHTKGNKN YALHSDDYTP QGQPFGGALS TTSFSLKVLF DQHQRGLNKW
160 170 180 190 200
SFPNDQLDLA RYRGCKFIFY RTKQTDWIGQ YDISEPYKLD KYSCPNYHPG
210 220 230 240 250
NLIKAKHKFL IPSYDTNPRG RQKIIVKIPP PDLFVDKWYT QEDLCSVNLV
260 270 280 290 300
SLAVSAASFL HPFGSPQTDN PCYTFQVLKE FYYQAIGFSA TDESRNYVFN
310 320 330 340 350
VLYEENSYWE SNITPFYVIN VKKGSNTXDY MSPXISDSHF RNKVNTNYNW
360 370 380 390 400
YTYNAKSHKN DLHXLRRAYF KQLTTEGPQQ TSSEKGYASQ WTTPTTDAYE
410 420 430 440 450
YHLGMFSTIF LAPDRPVPRF PCAYQDVTYN PLMDKGVGNH VWFQYNTKAD
460 470 480 490 500
TQLIVTGGSC KAHIEDIPLW AAFYGYSDFI ESELGPFVDA ETVGLICVIC
510 520 530 540 550
PYTKPPMYNK TNPMMGYVFY DRNFGDGKWI DGRGKIEPYW QVRWRPEMLF
560 570 580 590 600
QETVMADIVQ TGPFSYKDEL KNSTLVAKYK FYFTWGGNMM FQQTIKNPCK
610 620 630 640 650
TDGRPTDSDR HPRGIQVADP EQMGPRWVFH SFDWRRGYLS EGAIKRLHEK
660 670 680 690 700
PLDYESYFTQ PKRPRIFPPT EAAEGEFREP EKGSYSEEER SQASAEEQAT
710 720 730 740
EETVLLLKRR LREQRKLEQQ LQFLTREMFK TQAGLHINPM LLSQR
Length:745
Mass (Da):88,626
Last modified:November 1, 1999 - v1
Checksum:i08288DEB94C61324
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB025946 Genomic DNA Translation: BAA82149.2
RefSeqiYP_003587857.1, NC_014078.1

Genome annotation databases

GeneIDi9086617
KEGGivg:9086617

Similar proteinsi

Entry informationi

Entry nameiCAPSD_TTVV5
AccessioniPrimary (citable) accession number: Q9WSV7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: November 1, 1999
Last modified: May 23, 2018
This is version 40 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

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