##gff-version 3 Q9WN78 UniProtKB Initiator methionine 1 1 . . . Note=Removed%3B by host;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q9WN78 UniProtKB Chain 2 2194 . . . ID=PRO_0000426461;Note=Genome polyprotein Q9WN78 UniProtKB Chain 2 860 . . . ID=PRO_0000426462;Note=P1 Q9WN78 UniProtKB Chain 2 330 . . . ID=PRO_0000426463;Note=Capsid protein VP0 Q9WN78 UniProtKB Chain 2 69 . . . ID=PRO_0000426464;Note=Capsid protein VP4 Q9WN78 UniProtKB Chain 70 330 . . . ID=PRO_0000426465;Note=Capsid protein VP2 Q9WN78 UniProtKB Chain 331 568 . . . ID=PRO_0000426466;Note=Capsid protein VP3 Q9WN78 UniProtKB Chain 569 860 . . . ID=PRO_0000426467;Note=Capsid protein VP1 Q9WN78 UniProtKB Chain 851 1010 . . . ID=PRO_0000426469;Note=Protease 2A Q9WN78 UniProtKB Chain 861 1438 . . . ID=PRO_0000426468;Note=P2 Q9WN78 UniProtKB Chain 1011 1109 . . . ID=PRO_0000039765;Note=Protein 2B Q9WN78 UniProtKB Chain 1110 1438 . . . ID=PRO_0000039766;Note=Protein 2C Q9WN78 UniProtKB Chain 1439 2194 . . . ID=PRO_0000426470;Note=P3 Q9WN78 UniProtKB Chain 1439 1549 . . . ID=PRO_0000426471;Note=Protein 3AB Q9WN78 UniProtKB Chain 1439 1527 . . . ID=PRO_0000039767;Note=Protein 3A Q9WN78 UniProtKB Chain 1528 1549 . . . ID=PRO_0000426472;Note=Viral protein genome-linked Q9WN78 UniProtKB Chain 1550 2194 . . . ID=PRO_0000426473;Note=Protein 3CD Q9WN78 UniProtKB Chain 1550 1732 . . . ID=PRO_0000426474;Note=Protease 3C Q9WN78 UniProtKB Chain 1733 2194 . . . ID=PRO_0000426475;Note=RNA-directed RNA polymerase Q9WN78 UniProtKB Topological domain 2 1504 . . . Note=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9WN78 UniProtKB Intramembrane 1505 1520 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9WN78 UniProtKB Topological domain 1521 2194 . . . Note=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9WN78 UniProtKB Domain 1214 1370 . . . Note=SF3 helicase;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00551 Q9WN78 UniProtKB Domain 1550 1728 . . . Note=Peptidase C3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01222 Q9WN78 UniProtKB Domain 1959 2075 . . . Note=RdRp catalytic;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00539 Q9WN78 UniProtKB Zinc finger 1378 1395 . . . Note=C4-type%3B degenerate;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:B9VUU3 Q9WN78 UniProtKB Region 566 582 . . . Note=Amphipathic alpha-helix;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q9WN78 UniProtKB Region 1110 1248 . . . Note=Oligomerization;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q9WN78 UniProtKB Region 1110 1182 . . . Note=Membrane-binding;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q9WN78 UniProtKB Region 1131 1135 . . . Note=RNA-binding;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q9WN78 UniProtKB Region 1422 1429 . . . Note=RNA-binding;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q9WN78 UniProtKB Region 1433 1438 . . . Note=Oligomerization;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q9WN78 UniProtKB Active site 881 881 . . . Note=For protease 2A activity;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q9WN78 UniProtKB Active site 899 899 . . . Note=For protease 2A activity;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q9WN78 UniProtKB Active site 970 970 . . . Note=For protease 2A activity;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q9WN78 UniProtKB Active site 1589 1589 . . . Note=For protease 3C activity;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01222 Q9WN78 UniProtKB Active site 1620 1620 . . . Note=For protease 3C activity;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01222 Q9WN78 UniProtKB Active site 1696 1696 . . . Note=For protease 3C activity;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01222 Q9WN78 UniProtKB Binding site 916 916 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q9QF31 Q9WN78 UniProtKB Binding site 918 918 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q9QF31 Q9WN78 UniProtKB Binding site 976 976 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q9QF31 Q9WN78 UniProtKB Binding site 978 978 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q9QF31 Q9WN78 UniProtKB Binding site 1378 1378 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:B9VUU3 Q9WN78 UniProtKB Binding site 1390 1390 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:B9VUU3 Q9WN78 UniProtKB Binding site 1395 1395 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:B9VUU3 Q9WN78 UniProtKB Binding site 1965 1965 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q9WN78 UniProtKB Binding site 1965 1965 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q9WN78 UniProtKB Binding site 2061 2061 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q9WN78 UniProtKB Binding site 2061 2061 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q9WN78 UniProtKB Site 69 70 . . . Note=Cleavage%3B by autolysis;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q9WN78 UniProtKB Site 330 331 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 Q9WN78 UniProtKB Site 860 861 . . . Note=Cleavage%3B by autolysis;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 Q9WN78 UniProtKB Site 1010 1011 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 Q9WN78 UniProtKB Site 1109 1110 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 Q9WN78 UniProtKB Site 1134 1134 . . . Note=Involved in the interaction with host RTN3;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q66478 Q9WN78 UniProtKB Site 1438 1439 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 Q9WN78 UniProtKB Site 1527 1528 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 Q9WN78 UniProtKB Site 1549 1550 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 Q9WN78 UniProtKB Site 1732 1733 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 Q9WN78 UniProtKB Modified residue 1530 1530 . . . Note=O-(5'-phospho-RNA)-tyrosine;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q9WN78 UniProtKB Lipidation 2 2 . . . Note=N-myristoyl glycine%3B by host;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300