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Protein
Submitted name:

ARNT protein

Gene
N/A
Organism
Stenotomus chrysops (Scup) (Sparus chrysops)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
ARNT proteinImported
OrganismiStenotomus chrysops (Scup) (Sparus chrysops)Imported
Taxonomic identifieri35579 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataEupercariaSpariformesSparidaeStenotomus

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusSAAS annotation

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

ProteinModelPortaliQ9W752.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 39BHLHInterPro annotationAdd BLAST39
Domaini58 – 129PASInterPro annotationAdd BLAST72
Domaini267 – 316PASInterPro annotationAdd BLAST50

Phylogenomic databases

HOVERGENiHBG107503.

Family and domain databases

CDDicd00083. HLH. 1 hit.
cd00130. PAS. 2 hits.
Gene3Di4.10.280.10. 1 hit.
InterProiView protein in InterPro
IPR011598. bHLH_dom.
IPR036638. HLH_DNA-bd_sf.
IPR001067. Nuc_translocat.
IPR000014. PAS.
IPR035965. PAS-like_dom_sf.
IPR013767. PAS_fold.
IPR013655. PAS_fold_3.
PfamiView protein in Pfam
PF00010. HLH. 1 hit.
PF00989. PAS. 1 hit.
PF08447. PAS_3. 1 hit.
PRINTSiPR00785. NCTRNSLOCATR.
SMARTiView protein in SMART
SM00091. PAS. 2 hits.
SUPFAMiSSF47459. SSF47459. 1 hit.
SSF55785. SSF55785. 4 hits.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiView protein in PROSITE
PS50888. BHLH. 1 hit.
PS50112. PAS. 2 hits.

Sequencei

Sequence statusi: Fragment.

Q9W752-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
RMTAYITELS DMVPTCSALA RKPDKLTILR MAVSHMKSLR GSGNTNADGS
60 70 80 90 100
YKPSFLTDQE LKHLILEAAD GFLFVVSCET GRIVYVSDSL TPVLNQSQSE
110 120 130 140 150
WLGSSLYDQL HPDDTEKLRE QLSTAESNST GRMLDLKTGT VKKEGQQSSA
160 170 180 190 200
RMSMGARRSF ICRMRCGSCA VEPLSMNRLN FLRNRNRNGL GTAKEGEPQY
210 220 230 240 250
VVVHCTGYIK SWPPAGVSLT DDETDNTQGS RYCLVAIGRL QVTCCPGDTD
260 270 280 290 300
MNSISVPVEF ISRHNCQGMF TFIDHRCTAA VGYQPQDLLG KNILELAHPE
310 320 330 340
DQGLLRDSFQ QVVKLKGQVL SVMFRFRTKS REWIWMRTSS FTFQNP
Length:346
Mass (Da):38,706
Last modified:November 1, 1999 - v1
Checksum:iA5D4BBC83E6C06D6
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei346Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF155146 mRNA. Translation: AAD40677.1.

Similar proteinsi

Entry informationi

Entry nameiQ9W752_STECH
AccessioniPrimary (citable) accession number: Q9W752
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1999
Last sequence update: November 1, 1999
Last modified: October 25, 2017
This is version 87 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)