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Q9W4Z9 (Q9W4Z9_DROME) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 104. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
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Names and origin

Protein namesSubmitted name:
CG3071 EMBL AAF45765.1
Submitted name:
LD43561p EMBL AAL39804.1
Gene names
Name:EG:25E8.3 EMBL AAL39804.1
ORF Names:CG3071 FlyBase FBgn0023527, Dmel_CG3071 EMBL AAF45765.1
OrganismDrosophila melanogaster (Fruit fly)
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length535 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   DomainRepeat RuleBase RU003532
WD repeat RuleBase RU000362
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological processrRNA processing

Inferred from electronic annotation. Source: InterPro

   Cellular componentnucleolus

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9W4Z9 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: AAEFC032BD897F9D

FASTA53560,370
        10         20         30         40         50         60 
MQNSFLPLNT RRFRQRAQVE TPDTVYWDRL AKPELLKEHN TIDYLDFSPS DPDNFVVTCS 

        70         80         90        100        110        120 
VRVQIYNLVT MLVVKNLSRF QKTAYGATFR QDGRLLAAGD EEGHVKLFDT TSRNILRLFK 

       130        140        150        160        170        180 
GHTAPVHRTF FTADKLQLAS FGDDKSVRLW DVANEKVVQT YEDTHTDYVR AGAMHPQAGH 

       190        200        210        220        230        240 
MFVSGGYDGK IKLYDTRAET AVQRTLDHGA PVESMLFLPN GSIFVSAGGS QVRVWDLISG 

       250        260        270        280        290        300 
CRLLTMMSQH HKTVTCLRLG SDGRRLLSGG LDRHVKIYDV STYKTVHTLT YPNAVVSMAV 

       310        320        330        340        350        360 
ADGDQAVVAG MVDGLVSIRR MMVDSKPSHL KKIRADRARK YFVSTKRTNN TQEVDHTIKD 

       370        380        390        400        410        420 
HVKGPGLKSY DVHLRQFNHK KALDDVMNAQ KMQYQPELIV AVITDLLHRG SLGKALTGRH 

       430        440        450        460        470        480 
EAALVRFIDF ICNHLGEVRF MRPLMMAAST VLDVFEQRLV AYSQKLMKAL QRLSLAMQEE 

       490        500        510        520        530 
VRLTAELMRM KGAVDMLIGI SMDNSEVAHK PTYVETKTPK MHPSVAAQNY VVLVE

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley.
[3]Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M., Chavez C., Dorsett V., Farfan D., Frise E., George R., Gonzalez M., Guarin H., Li P., Liao G., Miranda A., Mungall C.J., Nunoo J. expand/collapse author list , Pacleb J., Paragas V., Park S., Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.
Submitted (DEC-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley EMBL AAL39804.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE014298 Genomic DNA. Translation: AAF45765.1.
AY069659 mRNA. Translation: AAL39804.1.
RefSeqNP_569993.1. NM_130637.3.
UniGeneDm.35.

3D structure databases

ProteinModelPortalQ9W4Z9.
SMRQ9W4Z9. Positions 38-324.
ModBaseSearch...

Protein-protein interaction databases

IntActQ9W4Z9. 1 interaction.
MINTMINT-840282.
STRINGQ9W4Z9.

Proteomic databases

PRIDEQ9W4Z9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0070398; FBpp0070382; FBgn0023527.
GeneID31213.
KEGGdme:Dmel_CG3071.
NMPDRfig|7227.3.peg.16223.
UCSCCG3071-RA. d. melanogaster.

Organism-specific databases

FlyBaseFBgn0023527. CG3071.

Phylogenomic databases

GeneTreeEMGT00050000004182.
InParanoidQ9W4Z9.
OMAQRDDILI.
PhylomeDBQ9W4Z9.

Gene expression databases

ArrayExpressQ9W4Z9.
BgeeQ9W4Z9.

Family and domain databases

InterProIPR018983. U3_snoRNA-assocProt_15_C.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR011046. WD40_repeat-like_dom.
IPR017986. WD40_repeat_dom.
[Graphical view]
Gene3DG3DSA:2.130.10.10. WD40/YVTN_repeat-like. 1 hit.
KOK14549.
PfamPF09384. UTP15_C. 1 hit.
PF00400. WD40. 4 hits.
[Graphical view]
SMARTSM00320. WD40. 7 hits.
[Graphical view]
SUPFAMSSF50978. WD40_like. 1 hit.
PROSITEPS50082. WD_REPEATS_2. 3 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio772482.

Entry information

Entry nameQ9W4Z9_DROME
AccessionPrimary (citable) accession number: Q9W4Z9
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: January 25, 2012
This is version 104 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info