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Q9W392 (Q9W392_DROME) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 106. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

SD02216p EMBL AAL13985.1
Gene names
ORF Names:CG7033 EMBL AAL13985.1 FlyBase FBgn0030086, Dmel_CG7033 EMBL AAF46442.2
OrganismDrosophila melanogaster (Fruit fly)
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryotaMetazoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora

Protein attributes

Sequence length535 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the TCP-1 chaperonin family. RuleBase RU004187

Sequences

Sequence LengthMass (Da)Tools
Q9W392 [UniParc].

Last modified October 1, 2002. Version 2.
Checksum: 0D57AD219C6B3FCA

FASTA53558,064
        10         20         30         40         50         60 
MEMSLNPVRV LKNEAQEEKA EMARLSSFIG AIAIGDLVKS TLGPKGMDKI LVATGRNAGH 

        70         80         90        100        110        120 
VEVTNDGATI LRAVGVDNPA AKILVDMSRV QDEEVGDGTT SVTVLASELL REAEKLVEQK 

       130        140        150        160        170        180 
LHPQIIVSGW RQATQVALEA LTAAAQDNSS SDEKFRNDLL NIARTTLSSK ILHQHKDFFA 

       190        200        210        220        230        240 
NLAVDAVMRL KGSGELKSIQ IIKKSGGTLG DSFLDEGFLL DKKPGVHQPQ RIENARILIA 

       250        260        270        280        290        300 
NTPMDTDKIK VFGSSIKVDS LAKIADLEMA EKEKMKEKVD KILKHKCNVF INRQLIYNYP 

       310        320        330        340        350        360 
EQLFADARVM SIEHADFDGI ERLAYCTGGE IVSTFENPSL VKLGECDVIE QVMIGEDTLL 

       370        380        390        400        410        420 
RFSGVKLGEA CTIVIRGATQ QILDEADRSL HDALCVLAAT VKESRIIFGG GCSEALMATA 

       430        440        450        460        470        480 
VLKKAAETPG KEAIAIEAFA RALLSLPTAI ADNAGYDSAQ LVSELRAGHA QGKQTLGLDM 

       490        500        510        520        530 
ELGKVADVRE LGITESFAVK RQVLMSASEA AEMILRVDNI IRCAPRRRVP DRGYC 

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley.
[3]Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M., Chavez C., Dorsett V., Farfan D., Frise E., George R., Gonzalez M., Guarin H., Li P., Liao G., Miranda A., Mungall C.J., Nunoo J. expand/collapse author list , Pacleb J., Paragas V., Park S., Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.
Submitted (OCT-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE014298 Genomic DNA. Translation: AAF46442.2.
AY058756 mRNA. Translation: AAL13985.1.
RefSeqNP_572524.1. NM_132296.3.
UniGeneDm.113.

3D structure databases

HSSPHSSP built from PDB template 1A6D based on UniProtKB P48424.
ProteinModelPortalQ9W392.
SMRQ9W392. Positions 15-526.
ModBaseSearch...

Protein-protein interaction databases

IntActQ9W392. 1 interaction.
MINTMINT-906628.
STRINGQ9W392.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0071289; FBpp0071226; FBgn0030086.
GeneID31838.
KEGGdme:Dmel_CG7033.
UCSCCG7033-RA. d. melanogaster.

Organism-specific databases

FlyBaseFBgn0030086. CG7033.

Phylogenomic databases

eggNOGinNOG06081.
GeneTreeEMGT00050000005235.
InParanoidQ9W392.
OMAPRTVYGG.
PhylomeDBQ9W392.

Gene expression databases

ArrayExpressQ9W392.
BgeeQ9W392.

Family and domain databases

InterProIPR012716. Chap_CCT_beta.
IPR017998. Chaperone_TCP-1.
IPR002194. Chaperonin_TCP-1_CS.
IPR002423. Cpn60/TCP-1.
[Graphical view]
KOK09494.
PANTHERPTHR11353:SF23. Chap_CCT_beta. 1 hit.
PTHR11353. Cpn60/TCP-1. 1 hit.
PfamPF00118. Cpn60_TCP1. 1 hit.
[Graphical view]
PRINTSPR00304. TCOMPLEXTCP1.
SUPFAMSSF48592. GroEL-ATPase. 1 hit.
TIGRFAMsTIGR02341. Chap_CCT_beta. 1 hit.
PROSITEPS00750. TCP1_1. 1 hit.
PS00751. TCP1_2. 1 hit.
PS00995. TCP1_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio775573.

Entry information

Entry nameQ9W392_DROME
AccessionPrimary (citable) accession number: Q9W392
Secondary accession number(s): Q95TI2
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: October 1, 2002
Last modified: January 25, 2012
This is version 106 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)