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Protein
Submitted name:

Cht6, isoform J

Gene

Cht6

Organism
Drosophila melanogaster (Fruit fly)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Protein family/group databases

CAZyiCBM14. Carbohydrate-Binding Module Family 14.
GH18. Glycoside Hydrolase Family 18.

Names & Taxonomyi

Protein namesi
Submitted name:
Cht6, isoform JImported (EC:3.2.1.14Imported)
Gene namesi
Name:Cht6Imported
ORF Names:CG43374Imported, Dmel_CG43374Imported
OrganismiDrosophila melanogaster (Fruit fly)Imported
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
Proteomesi
  • UP000000803 Componenti: Chromosome X

Organism-specific databases

FlyBaseiFBgn0263132. Cht6.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2828Sequence analysisAdd
BLAST
Chaini29 – 45194491Sequence analysisPRO_5004335685Add
BLAST

Proteomic databases

PaxDbiQ9W2Z3.
PRIDEiQ9W2Z3.

Expressioni

Gene expression databases

BgeeiQ9W2Z3.
ExpressionAtlasiQ9W2Z3. differential.
GenevisibleiQ9W2Z3. DM.

Interactioni

Protein-protein interaction databases

IntActiQ9W2Z3. 3 interactions.
STRINGi7227.FBpp0298358.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini503 – 56462Chitin-binding type-2InterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili2317 – 234024Sequence analysisAdd
BLAST
Coiled coili3643 – 366624Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis, SignalSequence analysis

Phylogenomic databases

eggNOGiKOG2806. Eukaryota.
COG3325. LUCA.
GeneTreeiENSGT00550000074323.
InParanoidiQ9W2Z3.

Family and domain databases

Gene3Di2.170.140.10. 1 hit.
3.10.50.10. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR002557. Chitin-bd_dom.
IPR011583. Chitinase_II.
IPR029070. Chitinase_insertion.
IPR001223. Glyco_hydro18_cat.
IPR001579. Glyco_hydro_18_chit_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF01607. CBM_14. 1 hit.
PF00704. Glyco_hydro_18. 1 hit.
[Graphical view]
SMARTiSM00494. ChtBD2. 1 hit.
SM00636. Glyco_18. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
SSF54556. SSF54556. 1 hit.
SSF57625. SSF57625. 1 hit.
PROSITEiPS50940. CHIT_BIND_II. 1 hit.
PS01095. CHITINASE_18. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9W2Z3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLPFRRGAAW QTLFLLCALA YCINEASSEG RVVCYYTNWS VYRPGTAKFN
60 70 80 90 100
PQNINPYLCT HLVYAFGGFT KDNQMKPFDK YQDIEQGGYA KFTGLKTYNK
110 120 130 140 150
QLKTMIAIGG WNEASSRFSP LVASNERRQQ FIKNILKFLR QNHFDGIDLD
160 170 180 190 200
WEYPAHREGG KSRDRDNYAQ FVQELRAEFE REAEKTGRTR LLLTMAVPAG
210 220 230 240 250
IEYIDKGYDV PKLNKYLDWF NVLTYDFHSS HEPSVNHHAP LYSLEEDSEY
260 270 280 290 300
NYDAELNIDY SIKYYLKAGA DRDKLVLGIP TYGRSYTLIN EESTELGAPA
310 320 330 340 350
EGPGEQGDAT REKGYLAYYE ICQTLKDDPE WTVVQPNANV MGPYAYRRNQ
360 370 380 390 400
WVGYDDEAIV RKKAEYVVAQ GLGGIMFWAI DNDDFRGTCN GKPYPLIEAA
410 420 430 440 450
KEAMVEALGL GINEVAKPSG PQKPSRSRSR DNASNRNRLN GKTEAPLSSR
460 470 480 490 500
RPSATRRPAV SSTQAPPPST TFKLTEAEGS SLYIGGRAST TPPPPTTPDP
510 520 530 540 550
GSDFKCEEEG FFQHPRDCKK YYWCLDSGPS GLGIVAHMFT CPSGLYFNPA
560 570 580 590 600
ADSCDFARNV PCKTKKSTTA APVTSTTPAT TTVRSNRVTA APTSRPVYPR
610 620 630 640 650
TTTTTSTTTT TTTTPSTVDE DLEYEEDTDE LSPSKSTDAE EDPQVIKELI
660 670 680 690 700
DLIRKVGGVE QLEKHLLRNK DGSITLKENS ATGAATTPST ISKSLYDRVL
710 720 730 740 750
SRPGTLNSFS RNRFKISEAS ETSTEPTTSS SSSRGSSTLT SNTNSKYSSV
760 770 780 790 800
LRGNSRQGPQ NEGIEKLAEF DGFLKERKQY VTINRHRSAS QGDEEEHADQ
810 820 830 840 850
QEEEENLAEV ETTTRRPLSS ITPSYTSLRR SRPTTVAPPA EESHEEAEQQ
860 870 880 890 900
TQTQVKSYAT LSRTRGRTTS SPEVTEAAPS STTNRYKYFE RTRPTKSATA
910 920 930 940 950
EDSEDPTEDE EEEYEDEQKD IVTVQSKQST NTRKYASIGR RTTTTTTATP
960 970 980 990 1000
ETTTTTTTTT AGTETAKAST TTNNNNNNNS HYNSSNNNNN VKLNNQLPTE
1010 1020 1030 1040 1050
ENITTTPSTT AQSETTTTTN ETTEPNESTS TTTTSITNNL HTTTTTPTPI
1060 1070 1080 1090 1100
VASTVPTTTA NGISSDSLLA TELSEASPTH LSPSPDSETS TPTTTSTTTT
1110 1120 1130 1140 1150
EQPELDTTTT TPKTTTTTTT GNNELNDVNN VDEDSEVTKT KTQYKYATTN
1160 1170 1180 1190 1200
RRRITTTTTT ATKNSNNNNN AEAANDASPT TNGLSSLNSI RTNPGRRQPQ
1210 1220 1230 1240 1250
PEQTQTTTSE PNLSSPRPFG YPRRRTRPTV STTTTTISQT DNDNNTDNND
1260 1270 1280 1290 1300
NETDAVAQVV KKTRLSPGDR PKVSASLPTA TAINTRTNTS SLHHQESQVE
1310 1320 1330 1340 1350
VAGNGGNDSL RHDVVSSSLS QSQSNKIDTD DLSTTQQHTK YTWRAVRRPA
1360 1370 1380 1390 1400
SQRTVVPNSL AGDDKDSRRF AGKQLNTESI VDDELQTTTK FRSRRLNSAE
1410 1420 1430 1440 1450
DESEVALEVA TATPTHGSRS YQSIQRSASK ASLDDSQIHY KAIIRDSEGG
1460 1470 1480 1490 1500
AHLTAGRSSS FVRNFGDAAK PTPPHQPISR GGQIVESTTE DENVAAEIID
1510 1520 1530 1540 1550
DEKRGETKAP AGSENTDDSN TATEQESPEI VTEAAQPQLE ITTLPSETSD
1560 1570 1580 1590 1600
VSSSTEQSVS STTEESSSST ADLDIVAEEA SLGAETDKKS TSENDNGESS
1610 1620 1630 1640 1650
TEISSSEAPI SSTTGQSEDV SSTTETNSEA IEKEIASDSN DGSSDDPASS
1660 1670 1680 1690 1700
TEFIEITNTT SSPVSLQEDS STTTEKLTRR AFNRFSSTTP AVVPEDETTS
1710 1720 1730 1740 1750
TVNQRRRVIV RNRISTTEAE SEAQTTTEEP KRRSFYRTST TAEPSSSTEA
1760 1770 1780 1790 1800
DSDAQISTET TTRRSFFRTR TTEAASSTTE EPSSPTEPEI EVETTTEGPT
1810 1820 1830 1840 1850
RRSFFRRSTT VAPSSTTEEI SSSSVDDDAE ANIITTRRSL FTTPAPSSTE
1860 1870 1880 1890 1900
ATTTATAEDS EVSSSTRRSF FRTSTTTEGT TSTTEEAKDI EHESETTAAL
1910 1920 1930 1940 1950
PKRRVIVRGN FRPRKEGDLS SLLAADANKR VRNNHSTTST ETPANSQSTT
1960 1970 1980 1990 2000
SNEEDTVAQP PQAEVKATTG RVSLNAVRNR TTTKTESLGN GITRTRTTYV
2010 2020 2030 2040 2050
RTLDAGQKIV KRIHTKTIEE KPAEYEYIID EVTHPPAAST TPRTVTRNRG
2060 2070 2080 2090 2100
SVRFQSNDLS SLLALDFASR STRKKQAQTE TTVTKTRRRL LKKPKETIEH
2110 2120 2130 2140 2150
EEVEEYEYEA GQEAGNEVEE APRVSTTART IIRRTRPTTI RTTTTETPQN
2160 2170 2180 2190 2200
IEASTRRASF AFKRPSKVST TTEEPTTSST EPTISAEATT RRVLNFRRPV
2210 2220 2230 2240 2250
STTSTPASDE STEEATAAPI EATTRRVLAF KRPVSTTTTP APVDEESTEE
2260 2270 2280 2290 2300
STPTSIEGNT RRILAYRRPV STTTTTPVPV EDESSTDQLA AAKQKFINRL
2310 2320 2330 2340 2350
KSSTTTTTSI PETTTTEEDL SDLKVQLSNA INRLQTENKL EVQTITKGSE
2360 2370 2380 2390 2400
AAEDEGDDKL SLPIYHRRKY YQYVKDSPIT YIDKSPAPPD IESVTVNIKQ
2410 2420 2430 2440 2450
QIHDVFNVSE NETPHNSLGD DEETEGHRVA MAQAKEINAE LGHFLLKTPG
2460 2470 2480 2490 2500
SKIKAQRQGK TFKTIPLATD SSNETSKIVS LSLLEEKERG EDEARALRTY
2510 2520 2530 2540 2550
TRLNRTRLTL STRLQEKTQS EPLDTTTRRS YSVPQRFRIR STTPIPSKIE
2560 2570 2580 2590 2600
NSEEDDEETK DNEGPSPSTT TVTPPSIKLP TRRLFTPRRP VNAVEDSDSS
2610 2620 2630 2640 2650
DIRKDNEEEL KVESTTKRLY AGLNRLRGRG STTTTTEEAT DSTTETATTT
2660 2670 2680 2690 2700
AKSTRQPYVG ISRRVTTTTT TEKSAESSTE YNGNEDEETE STTVTPEQEI
2710 2720 2730 2740 2750
SDDAEENKVA IKEIDDQVSK KAPEEAEDTS TEEPELEAFI DDDNEIPLEE
2760 2770 2780 2790 2800
SGPKTETTST TTTTTSTTTT TPASTTSRRQ LVIRRRFNGT ITTTTTVAPV
2810 2820 2830 2840 2850
ADENLENEID PSDTESSTPK AATTTSPRRQ LLIRRRFNAT SSGSTTTTTA
2860 2870 2880 2890 2900
NPSADNEIDQ GETKRTTRRP ILSRRRFNAT SITATTTGST NGDEISTRRP
2910 2920 2930 2940 2950
YAALNRSRNR FTTPQTTTTD GGANGDDDDY DGEEEEQLAP PRAVFLQTNR
2960 2970 2980 2990 3000
HRALKPTPED EEEGAAAVPG RRPLNFAARR TTAAPLRVSS STRRNLVAIN
3010 3020 3030 3040 3050
RNLYHRPEED NEEEPEEEYD ENEDGDDDQE ESVDPQVTST TTRSRLNQLL
3060 3070 3080 3090 3100
ANRQRQPLRT TTEKQTETDS NDTETDSDNG DENDDDEDND SSVEVSNSNH
3110 3120 3130 3140 3150
TLKHSTIFGV GTTNFNNLTN RSTALNVASQ RSNSTVANYI NRFKSNSYTN
3160 3170 3180 3190 3200
KNKPVTVTAN IKADSTDDKD NDNDEDDDDD DNDDDNYASL ENEGKEKTSG
3210 3220 3230 3240 3250
AGLNALGNDV NSTRRFQNRY QLSRTRGSTT TNTNPTTTQQ PQTTSTARRL
3260 3270 3280 3290 3300
AFGGRQRAQV TKLTLVDEQT EETETKGDSR EEEKEEEEEE DSNATTTTTT
3310 3320 3330 3340 3350
TTTSRPTPKR IRVLKFRRPL NSNSNSTINV DSTTNSATDT NPDTTTATPT
3360 3370 3380 3390 3400
TAGQSTTSNS NNNNNNTTST TGNKRFRKIV RKLRPVDSST AASVDNSDET
3410 3420 3430 3440 3450
TRKPFVPSHT RFADQDNDLV NLRQRIKEQQ ARGEPQDGVI SNRFKTLGQK
3460 3470 3480 3490 3500
DDQDVSELQK LRDKVKAEQA RGEGEQGVIN DRLKKLLAEK GSSISSQREE
3510 3520 3530 3540 3550
SSTDDDSSSV SSARPFFKRK LVARRPYTPP SASGGTTKAP LTFSTSRPTA
3560 3570 3580 3590 3600
KFVRRKNGRF DPFNSSVRNR GEGFVRSDPR GSRLPGTDRF KSQGNSEDDD
3610 3620 3630 3640 3650
EVEERHEQPL QNQFATTLRR PFVPKTRPVL DKSKPEQEDG AEESEEEDEE
3660 3670 3680 3690 3700
EDSEEEGDEE EDEEEEDVKP GGEEDNAQED NKPKFNSPYK PKDNRAPPGS
3710 3720 3730 3740 3750
RPTFGTTGSG SPPTASGNVP YNPRNRPSNS ANGNSTPSNR FGTTKRPRVV
3760 3770 3780 3790 3800
NRPPGVASPN LTLKPVASDY ERTTPLTPLK PAPFIPSNNR SYERKYSGPS
3810 3820 3830 3840 3850
TEAAETASEN SLIEDLNIDA LNARNKKIFD KHSKKHPALK PKVVKVESET
3860 3870 3880 3890 3900
GLEVEAGTEV AVEDETTEEQ QQEQGFVTTT PSTPPSPAPP STQSDTATTT
3910 3920 3930 3940 3950
DTPPETETET ETETETETET ENVTEIETAT NANEATSINS QDQTISSTTQ
3960 3970 3980 3990 4000
APPPATTLLH VFTLLEGEGQ EEEPTTRKPT VRLYPTIQTE VVPKHKLIEI
4010 4020 4030 4040 4050
NRIVEINSKQ AKAAQRKSKA NHDFSTLMVE SLPHVEQLGE ISVVKYVHLV
4060 4070 4080 4090 4100
DGSDIQINDG HSTVADYTPT EPTSAAERPV SLPVRNSLPE TEGADTDRSG
4110 4120 4130 4140 4150
KSLVPEVLTA ALETSTISLE GLFDSARKGK QLSSNTIIGE TEESTTIGSS
4160 4170 4180 4190 4200
SSLASETGET TTPAPTYVRP IVPLLRPESN ESSPLVISIA NLDQVILSKV
4210 4220 4230 4240 4250
QKSLAENSQT TVAPEAASDS NSAFSVRQPL VVQAPISNGA QEIDQDTLNT
4260 4270 4280 4290 4300
QDQTINGAIS VKTNPIIQTT TNRPNDDQVA EETTIFSIET ATEPELNTQT
4310 4320 4330 4340 4350
TIPKTEANSE TVTAMPIGAV IMGQFGLNTQ STTAVDNDNQ LNAQTTSTIS
4360 4370 4380 4390 4400
SGAVSSVAIG GNTQTANADN ARQENTQSTG TITSEISSGA ISSDNHNHIG
4410 4420 4430 4440 4450
TQTTATIDSS SETTPTQIST TISSGAISGH IDGSINLNTQ TNTTISTNNT
4460 4470 4480 4490 4500
TTSTTDVGSK VSEAVSFSSE THVVHRKKMG RKGRGRRLRN RKTTTTTTTT
4510
ETPTTTEATF DDTTTVVPE
Length:4,519
Mass (Da):495,289
Last modified:June 26, 2013 - v3
Checksum:i94D48D2B5AA21B9C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014298 Genomic DNA. Translation: AAF46544.3.
RefSeqiNP_572598.3. NM_132370.4.

Genome annotation databases

EnsemblMetazoaiFBtr0307374; FBpp0298363; FBgn0263132.
GeneIDi31935.
UCSCiCG2989-RA. d. melanogaster.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014298 Genomic DNA. Translation: AAF46544.3.
RefSeqiNP_572598.3. NM_132370.4.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ9W2Z3. 3 interactions.
STRINGi7227.FBpp0298358.

Protein family/group databases

CAZyiCBM14. Carbohydrate-Binding Module Family 14.
GH18. Glycoside Hydrolase Family 18.

Proteomic databases

PaxDbiQ9W2Z3.
PRIDEiQ9W2Z3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiFBtr0307374; FBpp0298363; FBgn0263132.
GeneIDi31935.
UCSCiCG2989-RA. d. melanogaster.

Organism-specific databases

CTDi31935.
FlyBaseiFBgn0263132. Cht6.

Phylogenomic databases

eggNOGiKOG2806. Eukaryota.
COG3325. LUCA.
GeneTreeiENSGT00550000074323.
InParanoidiQ9W2Z3.

Miscellaneous databases

ChiTaRSiCht6. fly.
GenomeRNAii31935.
NextBioi776024.

Gene expression databases

BgeeiQ9W2Z3.
ExpressionAtlasiQ9W2Z3. differential.
GenevisibleiQ9W2Z3. DM.

Family and domain databases

Gene3Di2.170.140.10. 1 hit.
3.10.50.10. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR002557. Chitin-bd_dom.
IPR011583. Chitinase_II.
IPR029070. Chitinase_insertion.
IPR001223. Glyco_hydro18_cat.
IPR001579. Glyco_hydro_18_chit_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF01607. CBM_14. 1 hit.
PF00704. Glyco_hydro_18. 1 hit.
[Graphical view]
SMARTiSM00494. ChtBD2. 1 hit.
SM00636. Glyco_18. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
SSF54556. SSF54556. 1 hit.
SSF57625. SSF57625. 1 hit.
PROSITEiPS50940. CHIT_BIND_II. 1 hit.
PS01095. CHITINASE_18. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The genome sequence of Drosophila melanogaster."
    Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D.
    , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
    Science 287:2185-2195(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.
  3. Cited for: GENOME REANNOTATION.
    Strain: BerkeleyImported.
  4. "The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective."
    Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R., Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M., Ashburner M., Celniker S.E.
    Genome Biol. 3:RESEARCH0084-RESEARCH0084(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.
  5. "Heterochromatic sequences in a Drosophila whole-genome shotgun assembly."
    Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A., Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G., Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M., Karpen G.H.
    Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.
  6. "Combined evidence annotation of transposable elements in genome sequences."
    Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D., Ashburner M., Anxolabehere D.
    PLoS Comput. Biol. 1:166-175(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.
  7. "The Release 5.1 annotation of Drosophila melanogaster heterochromatin."
    Smith C.D., Shu S., Mungall C.J., Karpen G.H.
    Science 316:1586-1591(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.
  8. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BerkeleyImported.

Entry informationi

Entry nameiQ9W2Z3_DROME
AccessioniPrimary (citable) accession number: Q9W2Z3
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: June 26, 2013
Last modified: May 11, 2016
This is version 130 of the entry and version 3 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.