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Q9W2N6 (Q9W2N6_DROME) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 100. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length957 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processRNA processing

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmRNA binding

Inferred from sequence or structural similarity PubMed 10908586. Source: FlyBase

nucleotide binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9W2N6 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: 6FC91F0BF770CDC2

FASTA957108,452
        10         20         30         40         50         60 
MSKQGNKSKD SAAASATLKR ISEKKLEAFT VGTFSKRQLS KKELEDQKKK EDAAAAAHAF 

        70         80         90        100        110        120 
KEFVETFQDA PTPSSKVWVK AGTYDAGSRR EDKSEKGKLY KPVSKLMEKS SSDKVEDYAK 

       130        140        150        160        170        180 
TLASDLKKDS GPLKKKNQEK KKSNLELFKE ELRQIQEERE ERHKYKHMAS SHSAPAQQPA 

       190        200        210        220        230        240 
ASAAPVPSSS VSTTSQNSSS SKESGSFDTG DPNTTNLYLG NLNPKISEQQ LMEIFGRYGP 

       250        260        270        280        290        300 
LASIKIMWPR SEEEKQRGRN CGFVAYMSRK DAERALKTLN GRYIMGYEMR LGWGKTVPIM 

       310        320        330        340        350        360 
NTPIFTPQAL LEMTLPPPPS GLPFNAQPPP SEADVLPKKN YKEFNQEDKE NMERILAKCV 

       370        380        390        400        410        420 
VKVHIPTEKA VLNVIHRMIE FVIREGPMFE ALIMIREMEN PLFAFLFDNE SPAHIYYRWK 

       430        440        450        460        470        480 
LFSLLQGDTP NEWREEEFRM FKNGPVWKPP IANFYTQGMP DELVVDPDAP VVHKGALSNA 

       490        500        510        520        530        540 
QRNRLEDLIR HLTPERARIG DAMIFCIEHA DAADEICECI AESLSNINTL ASKKIARLYL 

       550        560        570        580        590        600 
ISDILHNCTV KVANASFFRK SVEKQLLDIF DNLHNYYLNI ESRLKAEGFK SRVCNVIRTW 

       610        620        630        640        650        660 
EEWTIYPKDF MAQLTAKFLG KPYVKPVNNS PQAEETRFDE ALDEDIDGAP LSGEEKDDED 

       670        680        690        700        710        720 
LDGVPLDGAA LLKSALKRAI PDADAGTPKR DTPKKDEYLD EIDGIPLDDD LDGVPLEKET 

       730        740        750        760        770        780 
KSTAKLPGFI PSKWETVDPQ QVEAQAITTS KWDTLDPPDP PKFFSSDDDS GEDNPQKYTD 

       790        800        810        820        830        840 
EMRQKLRDIE SKAIQYQDEL ESGKRRLEPG WSVPEQVEQF RKRLLKQDSR SEATVDSPLS 

       850        860        870        880        890        900 
YMHIKSKSSK VSESPALFRS SSRKRSHSPF SGGESKRRDY SPETSRSSKS SKRNRSRSPS 

       910        920        930        940        950 
SSPKRYTERS SRSSRYETPA SGSSRSRSSP TSSRSSRREE PSPPRHRSDK HKHKHRH

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: Berkeley.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE013599 Genomic DNA. Translation: AAF46654.1.
RefSeqNP_611535.1. NM_137691.2.
UniGeneDm.2090.

3D structure databases

HSSPHSSP built from PDB template 3SXL based on UniProtKB P19339.
ProteinModelPortalQ9W2N6.
SMRQ9W2N6. Positions 217-294, 481-617.
ModBaseSearch...

Protein-protein interaction databases

IntActQ9W2N6. 1 interaction.
MINTMINT-914338.

Proteomic databases

PRIDEQ9W2N6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0071526; FBpp0071455; FBgn0034572.
GeneID37381.
KEGGdme:Dmel_CG9346.
UCSCCG9346-RA. d. melanogaster.

Organism-specific databases

FlyBaseFBgn0034572. CG9346.

Phylogenomic databases

GeneTreeENSGT00390000010687.
InParanoidQ9W2N6.
KOK12842.
OMASILQANS.
PhylomeDBQ9W2N6.

Gene expression databases

ArrayExpressQ9W2N6.
BgeeQ9W2N6.

Family and domain databases

Gene3D3.30.70.330. 1 hit.
InterProIPR006569. CID_dom.
IPR008942. ENTH_VHS.
IPR013170. mRNA_splic_Cwf21.
IPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
IPR000061. Surp.
[Graphical view]
PfamPF08312. cwf21. 1 hit.
PF00076. RRM_1. 1 hit.
PF01805. Surp. 1 hit.
[Graphical view]
SMARTSM00582. RPR. 1 hit.
SM00360. RRM. 1 hit.
SM00648. SWAP. 1 hit.
[Graphical view]
SUPFAMSSF48464. ENTH_VHS. 1 hit.
SSF109905. SSF109905. 1 hit.
PROSITEPS51391. CID. 1 hit.
PS50102. RRM. 1 hit.
PS50128. SURP. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

GenomeRNAi37381.
NextBio803361.

Entry information

Entry nameQ9W2N6_DROME
AccessionPrimary (citable) accession number: Q9W2N6
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: May 1, 2013
This is version 100 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info