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Unreviewed, UniProtKB/TrEMBL Q9W255 (Q9W255_DROME)

Last modified June 16, 2009. Version 65. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Quaking related 58E-1 EMBL AAF46844.1
Submitted name:
    GH05812p EMBL AAM50605.1
Gene names
Name: qkr58E-1 EMBL AAF46844.1 FlyBase FBgn0022986
ORF Names: CG3613 FlyBase FBgn0022986, Dmel_CG3613 EMBL AAF46844.1
OrganismDrosophila melanogaster (Fruit fly) [Complete proteome]
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryotaMetazoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora

Protein attributes

Sequence length396 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

General annotation (Comments)

Sequence similarities

Contains 1 KH domain. RuleBase RU003302V0

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionRNA binding

Inferred from electronic annotation. Source: InterPro

protein binding

Inferred from physical interaction. Source: IntAct

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9W255-1 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: CDD0110CF1117EBE

FASTA39645,384
        10         20         30         40         50         60 
MPRDYDRDYN EDAADYKRKR RDEEPAATGA PETPEADGGG HTTSHAALRD TPQLNEKTNA 

        70         80         90        100        110        120 
YLQECLLEKK TLEKKHIITK RLLDDEVEKI LVSGRIPKPE IYANVYSEKP IRVAQKVLFP 

       130        140        150        160        170        180 
IKEYPKFNFV GKILGPKGNT LRQLQEETMC KMVVMGRNSM RDHGKEEELR SSGNPKYAHL 

       190        200        210        220        230        240 
SRDLHVEIST VAPPAEAYHR ISYALGEIRK FMIPDANDDI RLEQLREMDG KERMYKKSHH 

       250        260        270        280        290        300 
YSKSYGDHGA YSSRTPPPAS SKPKVYSILE KARYVMDDPN YGIVKTHRSR DHELYDHHGE 

       310        320        330        340        350        360 
YDRYATPPPQ TSKHSTHHAQ YDSSSYERDY RREYHPHSSS SSYAAAYPAK PSNGRSSSSY 

       370        380        390 
RPTTSGSGSH SSAHYETGSR SRESVRYRSA PYPKIR 

« Hide

References

« Hide 'large scale' references
[1]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[3]Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M., Chavez C., Dorsett V., Dresnek D., Farfan D., Frise E., George R., Gonzalez M., Guarin H., Kronmiller B., Li P., Liao G., Miranda A. expand/collapse author list , Mungall C.J., Nunoo J., Pacleb J., Paragas V., Park S., Patel S., Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.
Submitted (JUN-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley EMBL AAM50605.1.

Cross-references

Sequence databases

AE013599 Genomic DNA. Translation: AAF46844.1.
AY118745 mRNA. Translation: AAM50605.1.
RefSeqNP_523809.2.
UniGeneDm.2571

3D structure databases

HSSPHSSP built from PDB template 1K1G based on UniProtKB Q9BW01.
ModBaseSearch...

Protein-protein interaction databases

IntActQ9W255. 14 interactions.

Proteomic databases

PRIDEQ9W255.

Genome annotation databases

EnsemblFBgn0022986. Drosophila melanogaster. [Contig view]
GeneID37561.
KEGGdme:Dmel_CG3613.
NMPDRfig|7227.3.peg.6842.

Organism-specific databases

FlyBaseFBgn0022986. qkr58E-1.

Phylogenomic databases

OMAQ9W255. EAYHRIS.

Gene expression databases

ArrayExpressQ9W255.

Family and domain databases

InterProIPR004087. KH.
IPR004088. KH_type_1.
[Graphical view]
SMARTSM00322. KH. 1 hit.
[Graphical view]
PROSITEPS50084. KH_TYPE_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio804294.

Entry information

Entry nameQ9W255_DROME
AccessionPrimary (citable) accession number: Q9W255
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: June 16, 2009
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information