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Q9W145 (Q9W145_DROME) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 87. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Putative cholesterol transporter EMBL AAR19767.1
Submitted name:
Start1, isoform A EMBL AAF47232.2
Gene names
Name:Start1 EMBL AAF47232.2 FlyBase FBgn0035028
ORF Names:CG3522 FlyBase FBgn0035028 EMBL AAR19767.1, Dmel_CG3522 EMBL AAF47232.2
OrganismDrosophila melanogaster (Fruit fly)
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length583 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 START domain. SAAS SAAS023393

Sequences

Sequence LengthMass (Da)Tools
Q9W145 [UniParc].

Last modified July 5, 2004. Version 2.
Checksum: F043047A5ADD6FF1

FASTA58365,823
        10         20         30         40         50         60 
MSNMDPSDVR STAQLILANA RQGNSAYNMQ YDMSRAHSIN LITEDFLAGY MQDGRMSVVR 

        70         80         90        100        110        120 
RFFCLFVTFD LVFVSLLWLI CIVINGDNIF TAFHKQIVEY TIYKSLFDVV AVAICRFLVL 

       130        140        150        160        170        180 
IFFYAILYIN HWSIIALSTS GSCLFLISKV FVFDWLDSKQ QVFEVILIIT SFILAWGEAW 

       190        200        210        220        230        240 
FLDCRVIPQE RHAQHYFRTM TSNDRTPMEQ PAILIEQERP PQSVTDFYSL MDTARHSDEE 

       250        260        270        280        290        300 
DELDDEYTQM GLDCLRKAYE IIESSDWKVE KVNQKGDTIH STQRDKIGKI YKLTARIKYP 

       310        320        330        340        350        360 
AKALMEDLFY RIEDCPKWNP ALLESKIVRK INSYTDITYQ VSVGGGGGMV KSRDFVNLRS 

       370        380        390        400        410        420 
CRLFYNGQIC DDDETAQLSS DDGNSSLNRS CEGSVSTISD GDSNTPLLPS SVSSCKATFP 

       430        440        450        460        470        480 
TSSKGAAMPF DTLGNSLGAK SLGPIVNFDE EPPPLDQDEF EDAKDKVDGE ANNMTKPNVP 

       490        500        510        520        530        540 
SVGKTKDRVW VTSAVSVQYA AVPPSPKYTR GQNIVSGFAF REIVGKSDSC IVEWVLCLDL 

       550        560        570        580 
KGYIPRYVLD AALTSSMTDY ISNLRKHVNE LRQKGRGRAP RTH

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley.
[3]"The Drosophila gene Start1: a putative cholesterol transporter and key regulator of ecdysteroid synthesis."
Roth G.E., Gierl M.S., Vollborn L., Meise M., Lintermann R., Korge G.
Proc. Natl. Acad. Sci. U.S.A. 101:1601-1606(2004) [PubMed: 14745013] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE013599 Genomic DNA. Translation: AAF47232.2.
AY455866 mRNA. Translation: AAR19767.1.
RefSeqNP_611936.2. NM_138092.1.
UniGeneDm.11675.

3D structure databases

ProteinModelPortalQ9W145.
ModBaseSearch...

Protein-protein interaction databases

IntActQ9W145. 1 interaction.
MINTMINT-973959.
STRINGQ9W145.

Protein family/group databases

TCDB9.B.64.1.2. putative cholesterol transporter (Start1) family.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0089868; FBpp0088807; FBgn0035028.
FBtr0305054; FBpp0293591; FBgn0035028.
GeneID37927.
KEGGdme:Dmel_CG3522.
UCSCCG3522-RA. d. melanogaster.

Organism-specific databases

CTD112046.
FlyBaseFBgn0035028. Start1.

Phylogenomic databases

GeneTreeEMGT00050000014538.
InParanoidQ9W145.
OMASGFAFRE.
PhylomeDBQ9W145.

Gene expression databases

ArrayExpressQ9W145.
BgeeQ9W145.

Family and domain databases

InterProIPR019498. MENTAL.
IPR000799. StAR.
IPR023393. START-like_dom.
IPR002913. START_lipid-bd.
[Graphical view]
Gene3DG3DSA:3.30.530.20. G3DSA:3.30.530.20. 2 hits.
PfamPF10457. MENTAL. 1 hit.
PF01852. START. 2 hits.
[Graphical view]
PRINTSPR00978. STARPROTEIN.
PROSITEPS51439. MENTAL. 1 hit.
PS50848. START. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio806088.

Entry information

Entry nameQ9W145_DROME
AccessionPrimary (citable) accession number: Q9W145
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: July 5, 2004
Last modified: January 25, 2012
This is version 87 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info