Q9W0M7 (Q9W0M7_DROME) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
CG13900, isoform A EMBL AAF47416.2

Submitted name:
FI04459p EMBL ADD20765.1
Submitted name:
LD01809p EMBL AAX33572.1

Gene names

Name:	CG13900-RA EMBL ADD20765.1
ORF Names:	CG13900 EMBL AAX33572.1 FlyBase FBgn0035162, Dmel_CG13900 EMBL AAF47416.2

Organism

Drosophila melanogaster (Fruit fly)

Taxonomic identifier

7227 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length	1227 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	mitotic spindle organization Inferred from mutant phenotype. Source: FlyBase nuclear mRNA splicing, via spliceosome Inferred by curator. Source: FlyBase
Cellular component	catalytic step 2 spliceosome Inferred from direct assay. Source: FlyBase precatalytic spliceosome Inferred from direct assay. Source: FlyBase
Molecular function	nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9W0M7 [UniParc]. Last modified October 1, 2002. Version 2. Checksum: 3E1C4527841321FB	FASTA	1,227	136,616
	10 20 30 40 50 60 MYLYNLTLQK ATGVTHAVHG NFSGGKQQEV LLSRGKSLEL LRPDSNTGKV HTLLSTEIFG 70 80 90 100 110 120 CVRALMAFRL TGGTKDYIVV GSDSGRIVIL EYNPSKNALE KVHQETFGKS GCRRIVPGQY 130 140 150 160 170 180 FAIDPKGRAV MIGAVEKQKL AYIMNRDTQA RLTISSPLEA HKSNTLTYHM VGVDVGFDNP 190 200 210 220 230 240 MFACLEIDYE EADMDPSGDA AQRTQQTLTF YELDLGLNHV VRKYSEPLEE HANFLVSVPG 250 260 270 280 290 300 GNDGPSGVLI CSENYLTYKN LGDQHDIRCP IPRRRNDLDD PERGMIFICS ATHRTKSMYF 310 320 330 340 350 360 FLLQTEQGDI FKITLETDDD VVSEIKLKYF DTVPPATAMC VLKTGFLFVA SEFGNHYLYQ 370 380 390 400 410 420 IAHLGDDDDE PEFSSAMPLE EGETFFFAPR ALKNLVLVDE LPSFAPIITS QVADLANEDT 430 440 450 460 470 480 PQLYVLCGRG PRSTLRVLRH GLEVSEMAVS ELPGNPNAVW TVKKRADDEF DAYIIVSFVN 490 500 510 520 530 540 ATLVLSIGET VEEVTDSGFL GTTPTLCCAA LGDDALVQVY PDGIRHIRSD KRVNEWKAPG 550 560 570 580 590 600 KKSITKCAVN QRQVVITLSG RELVYFEMDP TGELNEYTER SEMPAEIMCM ALGTVPEGEQ 610 620 630 640 650 660 RSWFLAVGLA DNTVRILSLD PNNCLTPCSM QALPSPAESL CLVEMGHTES TTQGGLDDDA 670 680 690 700 710 720 PAQRSGNNKG TIYLNIGLSN GVLLRTVLDP VSGDLADTRT RYLGSRPVKL FRIKMQGSEA 730 740 750 760 770 780 VLAMSSRTWL SYYHQNRFHL TPLSYETLEY ASGFSSEQCS EGIVAISTNT LRILALEKLG 790 800 810 820 830 840 AVFNQVAFPL QYTPRTFVIH PDTGRMLIAE TDHNAYTEDT KSARKEQMAE EMRSAAGDEE 850 860 870 880 890 900 RELAREMANA FINEVLPEDV FSSPKAGLGL WASQIRCLDA MHGQTMFSVP LTQNEAIMSM 910 920 930 940 950 960 AMLKFSIAAD GRYYLAVGIA KDLQLNPRIS QGGCIDIYKI DPTCSSLEFM HRTDIDEIPG 970 980 990 1000 1010 1020 ALCGFQGRLL AGCGRMLRIY DFGKKKMLRK CENKHIPYQI VNIQAMGHRV YVSDVQESVF 1030 1040 1050 1060 1070 1080 FIRYRRAENQ LIIFADDTHP RWVTATTLLD YDTIAIADKF GNLSIQRLPH SVTDDVDEDP 1090 1100 1110 1120 1130 1140 TGTKSLWDRG LLSGASQKSE NICSFHVGEI IMSLQKATLI PGGSEALIYA TLSGTVGAFV 1150 1160 1170 1180 1190 1200 PFTSREDYDF FQHLEMHMRN ENPPLCGRDH LSYRSSYYPV KNVLDGDLCE QYLSIEAAKQ 1210 1220 KSIAGDMFRT PNQICKKLED IRTRYAF

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The genome sequence of Drosophila melanogaster." Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C. Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Berkeley.
[2]	"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review." Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E. Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Berkeley.
[3]	Carlson J., Booth B., Frise E., Park S., Wan K., Yu C., Celniker S. Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[4]	Stapleton M., Carlson J., Chavez C., Frise E., George R., Pacleb J., Park S., Wan K., Yu C., Rubin G.M., Celniker S. Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Berkeley EMBL AAX33572.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE014296 Genomic DNA. Translation: AAF47416.2. BT021424 mRNA. Translation: AAX33572.1. BT120391 mRNA. Translation: ADD20765.1.
RefSeq	NP_728546.1. NM_167842.1.
UniGene	Dm.7679.
3D structure databases
ProteinModelPortal	Q9W0M7.
ModBase	Search...
Protein-protein interaction databases
MINT	MINT-1634219.
STRING	Q9W0M7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	FBtr0072597; FBpp0072494; FBgn0035162.
GeneID	38093.
KEGG	dme:Dmel_CG13900.
NMPDR	fig|7227.3.peg.4282.
UCSC	CG13900-RA. d. melanogaster.
Organism-specific databases
FlyBase	FBgn0035162. CG13900.
Phylogenomic databases
GeneTree	EMGT00050000015936.
InParanoid	Q9W0M7.
OMA	TLCGRGP.
PhylomeDB	Q9W0M7.
Gene expression databases
ArrayExpress	Q9W0M7.
Bgee	Q9W0M7.
Family and domain databases
InterPro	IPR004871. Cleavage/polyA-sp_fac_asu_C. IPR015943. WD40/YVTN_repeat-like_dom. [Graphical view]
Gene3D	G3DSA:2.130.10.10. WD40/YVTN_repeat-like. 3 hits.
KO	K12830.
Pfam	PF03178. CPSF_A. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	806961.

Entry information

Entry name

Q9W0M7_DROME

Accession

Primary (citable) accession number: Q9W0M7

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	October 1, 2002
Last modified:	January 25, 2012
This is version 83 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)