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Protein
Submitted name:

CG7879, isoform A

Gene

Dmel\CG7879

Organism
Drosophila melanogaster (Fruit fly)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • mRNA binding Source: FlyBase

GO - Biological processi

  • regulation of alternative mRNA splicing, via spliceosome Source: FlyBase

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
CG7879, isoform AImported
Submitted name:
CG7879, isoform BImported
Submitted name:
FI22004p1Imported
Gene namesi
Name:Dmel\CG7879Imported
Synonyms:CG7879-RBImported
ORF Names:CG7879Imported, Dmel_CG7879Imported
OrganismiDrosophila melanogaster (Fruit fly)Imported
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
Proteomesi
  • UP000000803 Componenti: Chromosome 3L

Organism-specific databases

FlyBaseiFBgn0035235. CG7879.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiFBgn0035235.

Interactioni

Protein-protein interaction databases

IntActiQ9W0D6. 12 interactors.
MINTiMINT-286284.
STRINGi7227.FBpp0072706.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini354 – 425RRMInterPro annotationAdd BLAST72
Domaini476 – 553RRMInterPro annotationAdd BLAST78
Domaini700 – 778RRMInterPro annotationAdd BLAST79

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili549 – 602Sequence analysisAdd BLAST54

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG4307. Eukaryota.
ENOG4111WZ9. LUCA.
GeneTreeiENSGT00760000119102.
OMAiEDARCAM.
OrthoDBiEOG091G02B3.

Family and domain databases

InterProiView protein in InterPro
IPR000504. RRM_dom.
PfamiView protein in Pfam
PF00076. RRM_1. 2 hits.
SMARTiView protein in SMART
SM00360. RRM. 5 hits.
SUPFAMiSSF54928. SSF54928. 5 hits.
PROSITEiView protein in PROSITE
PS50102. RRM. 3 hits.

Sequencei

Sequence statusi: Complete.

Q9W0D6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSVIIRLQNL PWTANARDIR NFFSGLSIPE GGVHIIGGEM GDAFIAFSTD
60 70 80 90 100
EDARCAMLKD REKLMEIQVR LLLSSRAEMQ KVIETARKAA SAQAPVSVPV
110 120 130 140 150
PMPVVVPVTA AKVAGPAAPL PPIIGGLNTF LGQGQVKGVA TGTVPSFLTY
160 170 180 190 200
QQQAGITLSD VTGRRSRSRS SSSDDSDRER ERDRQRERER GRKRRSDRLD
210 220 230 240 250
KSQERELKMV AGGGALPSPW AQPPQNQLPA VGLGLNMGLN LNLPQIPSLQ
260 270 280 290 300
SYTTSTTTTN VTNNYNLEPS ATSVQLLTAL QQVSSGSAAP AQPSKSESEP
310 320 330 340 350
IAFASVNPYA QMYPQLFQQQ QMLLQQQQTQ AKVSPTMGGS PGGGSTPQVV
360 370 380 390 400
ADTCYIRMSG MCQNTSYSDI RKYFQGMYIP HNGIKIMMVN GSRTGVAYVE
410 420 430 440 450
FSRVSSAQKA VQRNNTMFRD RLIQIVPVGD DEFEMAEERA SRQGQDGSRS
460 470 480 490 500
HGNHNGGDRG ERGGGAPVPV PRPVTNVLYI EDLPQTTTEQ DIMKMFSASY
510 520 530 540 550
TVVDILLSPS PKNRRESVAF VLFAREAEAD SALQDTSKHY IGFRQLRVRS
560 570 580 590 600
SSEEDMQNAK EKQRRANEQL LKEEADQREE LLKDQQRRQK QQQQENENIQ
610 620 630 640 650
ANRFAADPRR RQAEDQQQQQ QMNMGPNFNS NMSPNMMAPF VNGGNMPFHM
660 670 680 690 700
PPLQQNGVNN FPFNMNNNYN YNGNSNGNGP NYPNDNGGAG VIQRPRQEDV
710 720 730 740 750
FVRVHNCEYA TRANDLGELF SLEHLRIEHI EQLFNERNQS SGEFIVEFSD
760 770 780 790 800
PASCKLAIRE FHNRRFRGRG LRVVAITPQE IADRMKKPFM DYLPGGNGPR
810 820 830 840 850
KAETNNANDG AGGNKASAQP SRRRGPSRFD KPQEQPSQQQ DRPLSLERED
860 870 880 890 900
NSSTSSNAPV KQHFNPFARP DPPLSSSSLS PSNQGQVKPT SPVPVPTSII
910 920 930 940 950
PDKFNRPGCV VAMRNVPFKA ELKDIMRFFS DYKLSPDDII RRFNDEGKPT
960 970 980
GDTRVAFESP SEARSAFESR RKKQIFNRTV YLDII
Length:985
Mass (Da):109,558
Last modified:May 1, 2000 - v1
Checksum:i217A76F55961EE51
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014296 Genomic DNA. Translation: AAF47513.1.
AE014296 Genomic DNA. Translation: AAF47514.1.
BT150370 mRNA. Translation: AGW52180.1.
RefSeqiNP_647626.1. NM_139369.2.
NP_728631.1. NM_167896.2.
UniGeneiDm.21365.

Genome annotation databases

EnsemblMetazoaiFBtr0072826; FBpp0072706; FBgn0035235.
FBtr0072827; FBpp0072707; FBgn0035235.
GeneIDi38184.
KEGGidme:Dmel_CG7879.
UCSCiCG7879-RA. d. melanogaster.

Similar proteinsi

Entry informationi

Entry nameiQ9W0D6_DROME
AccessioniPrimary (citable) accession number: Q9W0D6
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: September 27, 2017
This is version 143 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported