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Protein
Submitted name:

FI01658p

Gene

RpL23A

Organism
Drosophila melanogaster (Fruit fly)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • cytoplasmic translation Source: FlyBase
  • ribosomal large subunit assembly Source: GO_Central

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationImported

Enzyme and pathway databases

ReactomeiR-DME-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-DME-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-DME-72689. Formation of a pool of free 40S subunits.
R-DME-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-DME-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-DME-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Submitted name:
FI01658pImported
Submitted name:
Ribosomal protein L23AImported
Submitted name:
Rpl23AImported
Gene namesi
Name:RpL23AImported
Synonyms:153215_atImported, anon-EST:fe2D1Imported, anon-EST:Liang-1.4Imported, clone 1.4Imported, Dmel\CG7977Imported, L23AImported, L23aImported, PBP-3Imported, Rp L23AImported, RPL23aImported, RpL23aImported, rpl23aImported, RpL25Imported, rpL25Imported
ORF Names:CG7977Imported, Dmel_CG7977Imported
OrganismiDrosophila melanogaster (Fruit fly)Imported
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
Proteomesi
  • UP000000803 Componenti: Chromosome 3L

Organism-specific databases

FlyBaseiFBgn0026372. RpL23A.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiFBgn0026372.

Interactioni

Protein-protein interaction databases

IntActiQ9W0A8. 17 interactors.
STRINGi7227.FBpp0072687.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4V6Welectron microscopy6.00CX1-277[»]
SMRiQ9W0A8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini141 – 187Ribosomal_L23eNInterPro annotationAdd BLAST47

Sequence similaritiesi

Belongs to the universal ribosomal protein uL23 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG1751. Eukaryota.
COG0089. LUCA.
GeneTreeiENSGT00390000003263.
KOiK02893.
OMAiPKRNRMD.
OrthoDBiEOG091G0UYL.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
HAMAPiMF_01369_A. Ribosomal_L23_A. 1 hit.
InterProiView protein in InterPro
IPR012677. Nucleotide-bd_a/b_plait_sf.
IPR012678. Ribosomal_L23/L15e_core_dom_sf.
IPR001014. Ribosomal_L23/L25_CS.
IPR005633. Ribosomal_L23/L25_N.
IPR013025. Ribosomal_L25/23.
PfamiView protein in Pfam
PF00276. Ribosomal_L23. 1 hit.
PF03939. Ribosomal_L23eN. 1 hit.
SUPFAMiSSF54189. SSF54189. 1 hit.
PROSITEiView protein in PROSITE
PS00050. RIBOSOMAL_L23. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9W0A8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPPKKPTEKS AKPGDKKPEQ KKTAAAPAAG KKEAAPSAAK PAAAAPKKAA
60 70 80 90 100
APAAKKAAPA AKKPATAGAA AKKPAAVKTT AAAKAKSKDA KKKVLAGKKP
110 120 130 140 150
QSVLAKLSAK ARAAAKAKKG VKPVTKPAKG TAKAKAVALL NAKKVQKKII
160 170 180 190 200
KGAFGTRARK IRTNVHFRRP TTLKLPRSPK YPRKSVPTRN RMDAYNIIKY
210 220 230 240 250
PLTTEAAMKK IEDNNTLVFL THLRANKNHV RAAVRKLYDI KVAKVNVLIR
260 270
PDGQKKAYVR LARDYDALDI ANKIGII
Length:277
Mass (Da):29,463
Last modified:May 1, 2000 - v1
Checksum:iDEFB458859D5EA22
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014296 Genomic DNA. Translation: AAF47545.1.
BT030798 mRNA. Translation: ABV82180.1.
KJ808685 mRNA. Translation: AJQ20731.1.
RefSeqiNP_523886.1. NM_079162.4.
UniGeneiDm.7339.

Genome annotation databases

EnsemblMetazoaiFBtr0072805; FBpp0072687; FBgn0026372.
GeneIDi38208.
KEGGidme:Dmel_CG7977.
UCSCiCG7977-RA. d. melanogaster.

Similar proteinsi

Entry informationi

Entry nameiQ9W0A8_DROME
AccessioniPrimary (citable) accession number: Q9W0A8
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: March 28, 2018
This is version 160 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported