Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q9VZY2

- Q9VZY2_DROME

UniProt

Q9VZY2 - Q9VZY2_DROME

Protein
Submitted name:

Myocardin-related transcription factor, isoform D

Gene

Mrtf

Organism
Drosophila melanogaster (Fruit fly)
Status
Unreviewed - Annotation score: 4 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 103 (01 Oct 2014)
      Sequence version 3 (26 Jun 2013)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. activating transcription factor binding Source: FlyBase
    2. nucleic acid binding Source: InterPro
    3. RNA polymerase II transcription coactivator activity Source: FlyBase

    GO - Biological processi

    1. actin cytoskeleton organization Source: FlyBase
    2. border follicle cell migration Source: FlyBase
    3. cellular response to hypoxia Source: FlyBase
    4. imaginal disc-derived wing morphogenesis Source: FlyBase
    5. mesodermal cell migration Source: FlyBase
    6. open tracheal system development Source: FlyBase
    7. positive regulation of transcription from RNA polymerase II promoter Source: FlyBase
    8. regulation of cell division Source: FlyBase

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Myocardin-related transcription factor, isoform DImported
    Submitted name:
    Myocardin-related transcription factor, isoform GImported
    Gene namesi
    Name:MrtfImported
    ORF Names:CG32296Imported, Dmel_CG32296Imported
    OrganismiDrosophila melanogaster (Fruit fly)Imported
    Taxonomic identifieri7227 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
    ProteomesiUP000000803: Chromosome 3L

    Organism-specific databases

    FlyBaseiFBgn0052296. Mrtf.

    Subcellular locationi

    GO - Cellular componenti

    1. cytoplasm Source: FlyBase
    2. nucleus Source: FlyBase

    Interactioni

    Protein-protein interaction databases

    MINTiMINT-1657281.
    STRINGi7227.FBpp0288507.

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00530000063195.
    InParanoidiQ9VZY2.

    Family and domain databases

    Gene3Di1.10.720.30. 1 hit.
    InterProiIPR004018. RPEL_repeat.
    IPR003034. SAP_dom.
    [Graphical view]
    PfamiPF02755. RPEL. 2 hits.
    PF02037. SAP. 1 hit.
    [Graphical view]
    SMARTiSM00707. RPEL. 3 hits.
    SM00513. SAP. 1 hit.
    [Graphical view]
    PROSITEiPS51073. RPEL. 3 hits.
    PS50800. SAP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q9VZY2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSEGEQRLHA TFLGSSDDGN NSDCYDARQS PPKAIVDSSP LQPAMDKNKE     50
    SLKVKLMVRR PHSQLVEQGI IPSLKTSPAI HEQCKQLERA KTSDLLKAKI 100
    QQRPNREDLE RLHILEEDEC HIDPSLAEKQ RMLKKARLAD QLNSQIQHRP 150
    GPLELIKKNI LHTEKPIEKI VKEGLVSFKA TSEGLLTRPQ HPHSYVTFDD 200
    DSLSSESDTR QTPPRLDEAM VATSSSPTDV LQAAAASAGI VTMALTMPTA 250
    GQLVVTSPQI LPQQQQPKAI VVPAPVPPPP PPPPPLPMAS IIKVKQETAN 300
    LYEELCQSVT GTTASPVNHL YSPCSLASST STLSPLSSIA SPPPPPMTTT 350
    RLHLAPVSVK SDAPGKDKNR KKSKSKPVSK ARTIKFHEYK GPPSAAGQKQ 400
    DQTQPEETSY QLMLEQQNCL LKFLENLNKN QSIIPAPSAP GVMLPAAPGA 450
    TNNSITVTTK TVPALASQSA PAPAPISLPN TISITSSSGG APLNFGDATM 500
    LTPTPAATPT PPTLSLIAAP QQQLQLHQQH QQLHQPTPVQ HPPPLPSPAL 550
    SVSSSIPPSP ATSYAESTTS SITDLARLEK MKVSDLKQHL KRRNLPVSGP 600
    KPHLIERLKP YLPLEPLDSN VTPAPTSNNS NTTPEVITIS DAMDTSNCGL 650
    LEQPPPVTML VSDASMEHEQ MDVVQQQMDN THPMTLQTIL PPQPQTATII 700
    LTNEELLREQ QRKIDELQRQ LQRSQQELQK IRQRQQQQQH QQQQTVTAQV 750
    VNALPSQQIT LITTTSNGPQ QTLTVMPQQV EKNFPAKVTV KATGGNSNHK 800
    VNGLQQQGSA AKKPASSNSN SNSNISSSNP PPINQKMVVK QQLEAKIQKQ 850
    KAAAAAAAQQ QQQQQQQQQQ QQQQQALQQQ QQQQQQQQQV RLLTQKTQTV 900
    FIPFNNNNHI NNASAKTTTK KSNVPANNTN TTTATMMQAA KPAAVAAAAA 950
    SPGNQHHNNL GLLWNEGNQT ILLLGLNDQH MTAHTLGNIS LTATTTTTAA 1000
    PPAATPVAAS TIAPPKKILN GHQRTNSLPS IVFPIETKSI ITQQQLQQLQ 1050
    QQQQQQQQFQ PVQQPKQQQL NQVDIKPAPA PPPQYEEATK QLAASKAAAL 1100
    NGLLPLVKIK EEPVQSPAPS AAPLPQTAPL CKRKTASIKS EQVSDVLDIL 1150
    IKQGELPESA ALEPITPLTP LPELSMFNGA TPTTAAGGAS IVPLVPKLET 1200
    PVTPVQNLDV AMDTNVQHVG FASNQAPNHV FIESIDMASP LQTDSSAIDA 1250
    ESVAKTLDIF LEQHHATPPP STPPKSCHSG SEKPNSPDAK LNHFDEYELL 1300
    ELMSQQLEMD MGDDSSGYCH ASAAKSSNNN GNLRRDLNPS LQPSINELLD 1350
    ASSPDNVLLN NNTGADVDFD ADSFVAQLSQ HVTGNGNSPG VNCNGSIESS 1400
    SSAVNSHFGS HSTPMDCDDF ESTLNSFMQA VTQPQAGQHV EYATSTSMAN 1450
    GTGGGMGVDN GTGGAVDAFN ASGDIFDLFN MDDYKMNWAA GDFTV 1495
    Length:1,495
    Mass (Da):160,890
    Last modified:June 26, 2013 - v3
    Checksum:iAAC1D1F1E309A0B5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE014296 Genomic DNA. Translation: ACL83234.2.
    AE014296 Genomic DNA. Translation: AFH04251.1.
    RefSeqiNP_001137878.2. NM_001144406.3.
    NP_001246580.1. NM_001259651.2.
    NP_728775.2. NM_167965.4.
    UniGeneiDm.13305.

    Genome annotation databases

    EnsemblMetazoaiFBtr0306331; FBpp0297427; FBgn0052296.
    FBtr0333443; FBpp0305634; FBgn0052296.
    FBtr0333444; FBpp0305635; FBgn0052296.
    GeneIDi38338.
    KEGGidme:Dmel_CG32296.
    UCSCiCG32296-RA. d. melanogaster.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE014296 Genomic DNA. Translation: ACL83234.2 .
    AE014296 Genomic DNA. Translation: AFH04251.1 .
    RefSeqi NP_001137878.2. NM_001144406.3.
    NP_001246580.1. NM_001259651.2.
    NP_728775.2. NM_167965.4.
    UniGenei Dm.13305.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    MINTi MINT-1657281.
    STRINGi 7227.FBpp0288507.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblMetazoai FBtr0306331 ; FBpp0297427 ; FBgn0052296 .
    FBtr0333443 ; FBpp0305634 ; FBgn0052296 .
    FBtr0333444 ; FBpp0305635 ; FBgn0052296 .
    GeneIDi 38338.
    KEGGi dme:Dmel_CG32296.
    UCSCi CG32296-RA. d. melanogaster.

    Organism-specific databases

    CTDi 38338.
    FlyBasei FBgn0052296. Mrtf.

    Phylogenomic databases

    GeneTreei ENSGT00530000063195.
    InParanoidi Q9VZY2.

    Miscellaneous databases

    ChiTaRSi Mrtf. drosophila.
    GenomeRNAii 38338.
    NextBioi 808101.

    Family and domain databases

    Gene3Di 1.10.720.30. 1 hit.
    InterProi IPR004018. RPEL_repeat.
    IPR003034. SAP_dom.
    [Graphical view ]
    Pfami PF02755. RPEL. 2 hits.
    PF02037. SAP. 1 hit.
    [Graphical view ]
    SMARTi SM00707. RPEL. 3 hits.
    SM00513. SAP. 1 hit.
    [Graphical view ]
    PROSITEi PS51073. RPEL. 3 hits.
    PS50800. SAP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence of Drosophila melanogaster."
      Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D.
      , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
      Science 287:2185-2195(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BerkeleyImported.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BerkeleyImported.
    3. Cited for: GENOME REANNOTATION.
      Strain: BerkeleyImported.
    4. "The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective."
      Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R., Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M., Ashburner M., Celniker S.E.
      Genome Biol. 3:RESEARCH0084.1-RESEARCH0084.20(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BerkeleyImported.
    5. "Heterochromatic sequences in a Drosophila whole-genome shotgun assembly."
      Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A., Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G., Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M., Karpen G.H.
      Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BerkeleyImported.
    6. "Combined evidence annotation of transposable elements in genome sequences."
      Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D., Ashburner M., Anxolabehere D.
      PLoS Comput. Biol. 1:166-175(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BerkeleyImported.
    7. Celniker S., Carlson J., Wan K., Frise E., Hoskins R., Park S., Svirskas R., Rubin G.
      Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    8. "Drosophila melanogaster release 4 sequence."
      Berkeley Drosophila Genome Project
      Celniker S., Carlson J., Wan K., Pfeiffer B., Frise E., George R., Hoskins R., Stapleton M., Pacleb J., Park S., Svirskas R., Smith E., Yu C., Rubin G.
      Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    9. "The Release 5.1 annotation of Drosophila melanogaster heterochromatin."
      Smith C.D., Shu S., Mungall C.J., Karpen G.H.
      Science 316:1586-1591(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BerkeleyImported.
    10. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BerkeleyImported.
    11. FlyBase
      Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.

    Entry informationi

    Entry nameiQ9VZY2_DROME
    AccessioniPrimary (citable) accession number: Q9VZY2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 1, 2000
    Last sequence update: June 26, 2013
    Last modified: October 1, 2014
    This is version 103 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3