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Q9VZY2

- Q9VZY2_DROME

UniProt

Q9VZY2 - Q9VZY2_DROME

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Protein
Submitted name: Myocardin-related transcription factor, isoform D
Gene
Mrtf, CG32296, Dmel_CG32296
Organism
Drosophila melanogaster (Fruit fly)
Status
Unreviewed - Annotation score: 4 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. RNA polymerase II transcription coactivator activity Source: FlyBase
  2. activating transcription factor binding Source: FlyBase
  3. nucleic acid binding Source: InterPro

GO - Biological processi

  1. actin cytoskeleton organization Source: FlyBase
  2. border follicle cell migration Source: FlyBase
  3. cellular response to hypoxia Source: FlyBase
  4. imaginal disc-derived wing morphogenesis Source: FlyBase
  5. mesodermal cell migration Source: FlyBase
  6. open tracheal system development Source: FlyBase
  7. positive regulation of transcription from RNA polymerase II promoter Source: FlyBase
  8. regulation of cell division Source: FlyBase
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Myocardin-related transcription factor, isoform DImported
Submitted name:
Myocardin-related transcription factor, isoform GImported
Gene namesi
Name:MrtfImported
ORF Names:CG32296Imported, Dmel_CG32296Imported
OrganismiDrosophila melanogaster (Fruit fly)Imported
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
ProteomesiUP000000803: Chromosome 3L

Organism-specific databases

FlyBaseiFBgn0052296. Mrtf.

Subcellular locationi

GO - Cellular componenti

  1. cytoplasm Source: FlyBase
  2. nucleus Source: FlyBase
Complete GO annotation...

Interactioni

Protein-protein interaction databases

MINTiMINT-1657281.
STRINGi7227.FBpp0288507.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00530000063195.
InParanoidiQ9VZY2.

Family and domain databases

Gene3Di1.10.720.30. 1 hit.
InterProiIPR004018. RPEL_repeat.
IPR003034. SAP_dom.
[Graphical view]
PfamiPF02755. RPEL. 2 hits.
PF02037. SAP. 1 hit.
[Graphical view]
SMARTiSM00707. RPEL. 3 hits.
SM00513. SAP. 1 hit.
[Graphical view]
PROSITEiPS51073. RPEL. 3 hits.
PS50800. SAP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9VZY2-1 [UniParc]FASTAAdd to Basket

« Hide

MSEGEQRLHA TFLGSSDDGN NSDCYDARQS PPKAIVDSSP LQPAMDKNKE     50
SLKVKLMVRR PHSQLVEQGI IPSLKTSPAI HEQCKQLERA KTSDLLKAKI 100
QQRPNREDLE RLHILEEDEC HIDPSLAEKQ RMLKKARLAD QLNSQIQHRP 150
GPLELIKKNI LHTEKPIEKI VKEGLVSFKA TSEGLLTRPQ HPHSYVTFDD 200
DSLSSESDTR QTPPRLDEAM VATSSSPTDV LQAAAASAGI VTMALTMPTA 250
GQLVVTSPQI LPQQQQPKAI VVPAPVPPPP PPPPPLPMAS IIKVKQETAN 300
LYEELCQSVT GTTASPVNHL YSPCSLASST STLSPLSSIA SPPPPPMTTT 350
RLHLAPVSVK SDAPGKDKNR KKSKSKPVSK ARTIKFHEYK GPPSAAGQKQ 400
DQTQPEETSY QLMLEQQNCL LKFLENLNKN QSIIPAPSAP GVMLPAAPGA 450
TNNSITVTTK TVPALASQSA PAPAPISLPN TISITSSSGG APLNFGDATM 500
LTPTPAATPT PPTLSLIAAP QQQLQLHQQH QQLHQPTPVQ HPPPLPSPAL 550
SVSSSIPPSP ATSYAESTTS SITDLARLEK MKVSDLKQHL KRRNLPVSGP 600
KPHLIERLKP YLPLEPLDSN VTPAPTSNNS NTTPEVITIS DAMDTSNCGL 650
LEQPPPVTML VSDASMEHEQ MDVVQQQMDN THPMTLQTIL PPQPQTATII 700
LTNEELLREQ QRKIDELQRQ LQRSQQELQK IRQRQQQQQH QQQQTVTAQV 750
VNALPSQQIT LITTTSNGPQ QTLTVMPQQV EKNFPAKVTV KATGGNSNHK 800
VNGLQQQGSA AKKPASSNSN SNSNISSSNP PPINQKMVVK QQLEAKIQKQ 850
KAAAAAAAQQ QQQQQQQQQQ QQQQQALQQQ QQQQQQQQQV RLLTQKTQTV 900
FIPFNNNNHI NNASAKTTTK KSNVPANNTN TTTATMMQAA KPAAVAAAAA 950
SPGNQHHNNL GLLWNEGNQT ILLLGLNDQH MTAHTLGNIS LTATTTTTAA 1000
PPAATPVAAS TIAPPKKILN GHQRTNSLPS IVFPIETKSI ITQQQLQQLQ 1050
QQQQQQQQFQ PVQQPKQQQL NQVDIKPAPA PPPQYEEATK QLAASKAAAL 1100
NGLLPLVKIK EEPVQSPAPS AAPLPQTAPL CKRKTASIKS EQVSDVLDIL 1150
IKQGELPESA ALEPITPLTP LPELSMFNGA TPTTAAGGAS IVPLVPKLET 1200
PVTPVQNLDV AMDTNVQHVG FASNQAPNHV FIESIDMASP LQTDSSAIDA 1250
ESVAKTLDIF LEQHHATPPP STPPKSCHSG SEKPNSPDAK LNHFDEYELL 1300
ELMSQQLEMD MGDDSSGYCH ASAAKSSNNN GNLRRDLNPS LQPSINELLD 1350
ASSPDNVLLN NNTGADVDFD ADSFVAQLSQ HVTGNGNSPG VNCNGSIESS 1400
SSAVNSHFGS HSTPMDCDDF ESTLNSFMQA VTQPQAGQHV EYATSTSMAN 1450
GTGGGMGVDN GTGGAVDAFN ASGDIFDLFN MDDYKMNWAA GDFTV 1495
Length:1,495
Mass (Da):160,890
Last modified:June 26, 2013 - v3
Checksum:iAAC1D1F1E309A0B5
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE014296 Genomic DNA. Translation: ACL83234.2.
AE014296 Genomic DNA. Translation: AFH04251.1.
RefSeqiNP_001137878.2. NM_001144406.3.
NP_001246580.1. NM_001259651.2.
NP_728775.2. NM_167965.4.
UniGeneiDm.13305.

Genome annotation databases

EnsemblMetazoaiFBtr0306331; FBpp0297427; FBgn0052296.
FBtr0333443; FBpp0305634; FBgn0052296.
FBtr0333444; FBpp0305635; FBgn0052296.
GeneIDi38338.
KEGGidme:Dmel_CG32296.
UCSCiCG32296-RA. d. melanogaster.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE014296 Genomic DNA. Translation: ACL83234.2 .
AE014296 Genomic DNA. Translation: AFH04251.1 .
RefSeqi NP_001137878.2. NM_001144406.3.
NP_001246580.1. NM_001259651.2.
NP_728775.2. NM_167965.4.
UniGenei Dm.13305.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

MINTi MINT-1657281.
STRINGi 7227.FBpp0288507.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai FBtr0306331 ; FBpp0297427 ; FBgn0052296 .
FBtr0333443 ; FBpp0305634 ; FBgn0052296 .
FBtr0333444 ; FBpp0305635 ; FBgn0052296 .
GeneIDi 38338.
KEGGi dme:Dmel_CG32296.
UCSCi CG32296-RA. d. melanogaster.

Organism-specific databases

CTDi 38338.
FlyBasei FBgn0052296. Mrtf.

Phylogenomic databases

GeneTreei ENSGT00530000063195.
InParanoidi Q9VZY2.

Miscellaneous databases

ChiTaRSi Mrtf. drosophila.
GenomeRNAii 38338.
NextBioi 808101.

Family and domain databases

Gene3Di 1.10.720.30. 1 hit.
InterProi IPR004018. RPEL_repeat.
IPR003034. SAP_dom.
[Graphical view ]
Pfami PF02755. RPEL. 2 hits.
PF02037. SAP. 1 hit.
[Graphical view ]
SMARTi SM00707. RPEL. 3 hits.
SM00513. SAP. 1 hit.
[Graphical view ]
PROSITEi PS51073. RPEL. 3 hits.
PS50800. SAP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The genome sequence of Drosophila melanogaster."
    Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D.
    , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A., An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T., Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
    Science 287:2185-2195(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Berkeley.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Berkeley.
  3. Cited for: GENOME REANNOTATION.
    Strain: Berkeley.
  4. "The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective."
    Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R., Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M., Ashburner M., Celniker S.E.
    Genome Biol. 3:RESEARCH0084-RESEARCH0084(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Berkeley.
  5. "Heterochromatic sequences in a Drosophila whole-genome shotgun assembly."
    Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A., Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G., Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M., Karpen G.H.
    Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Berkeley.
  6. "Combined evidence annotation of transposable elements in genome sequences."
    Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D., Ashburner M., Anxolabehere D.
    PLoS Comput. Biol. 1:166-175(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Berkeley.
  7. Celniker S., Carlson J., Wan K., Frise E., Hoskins R., Park S., Svirskas R., Rubin G.
    Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  8. "Drosophila melanogaster release 4 sequence."
    Berkeley Drosophila Genome Project
    Celniker S., Carlson J., Wan K., Pfeiffer B., Frise E., George R., Hoskins R., Stapleton M., Pacleb J., Park S., Svirskas R., Smith E., Yu C., Rubin G.
    Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  9. "The Release 5.1 annotation of Drosophila melanogaster heterochromatin."
    Smith C.D., Shu S., Mungall C.J., Karpen G.H.
    Science 316:1586-1591(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Berkeley.
  10. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Berkeley.
  11. FlyBase
    Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ9VZY2_DROME
AccessioniPrimary (citable) accession number: Q9VZY2
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: June 26, 2013
Last modified: June 11, 2014
This is version 102 of the entry and version 3 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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