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Q9VYX2 (Q9VYX2_DROME) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 98. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
CG11696 EMBL AAF48061.1
Submitted name:
LD18373p EMBL AAL28792.1
Gene names
ORF Names:CG11696 FlyBase FBgn0030314 EMBL AAL28792.1, Dmel_CG11696 EMBL AAF48061.1
OrganismDrosophila melanogaster (Fruit fly)
Taxonomic identifier7227 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length664 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular componentnucleus

Inferred from electronic annotation. Source: InterPro

   Molecular functionDNA binding

Inferred from electronic annotation. Source: InterPro

zinc ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9VYX2 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: C11874D2702463C6

FASTA66475,763
        10         20         30         40         50         60 
MICRLCLEDA EHGVPIFGQE PPMGQPAHRQ LAELIERHLL LVLAENDVVS TCLCNRCWRQ 

        70         80         90        100        110        120 
LAEIEQFCSM VAEKQRSLHR SLQLKTELPE LPELTEPEPA LVVWNTESPI EPKLSYEGDD 

       130        140        150        160        170        180 
IKDHILCEPV IDALSAGDEK DSDYGDTFEP DFEPESQPDE EEEPEPDPVK PRPRGRPRKT 

       190        200        210        220        230        240 
ALQQTHQIIK RKYEKRKQQN KAKITELSLR ESRARQRELK RSSAGAEDDQ DGDEDEEDEE 

       250        260        270        280        290        300 
DVGGELTPDA DEQPKPRGKR GRPKTKKLVT ADDNDDTSEV PVKRSSIKEM DDYIAANVKL 

       310        320        330        340        350        360 
DCAICAAPLE DFNDLKRHFR VEHDCTGYVK CCNNRYKKRT LYVDHLHCHK DPQYFSCQSC 

       370        380        390        400        410        420 
RKNFLNRNSQ VMHMLRFHSQ QQELVHQCAI CEARFAKKFL LTMHLKGHKG TERPEVCDTC 

       430        440        450        460        470        480 
SKTFRTKFEL SAHVKRMHAA DFTPIICDIC GTHFRSKANF LIHKKALHPD GPVAEVQCTL 

       490        500        510        520        530        540 
CGRWLRDERS LRKHLARHDD RDGDTKYRCL LCNAEKSSRA ALSSHMRYHH SAKRHKCSLC 

       550        560        570        580        590        600 
DKEFKLPRAL AEHMATHTGI DLYQCQFCTR TFKSHANMHN HKKKMHPNDW VRKYSQPSSS 

       610        620        630        640        650        660 
ITSTAAPLAH PNHPNQPAPP AAAPTNLAGH MLPPLGGIAK SLIEIPDTEG FDFGSNSSVC 


PTPD

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence of Drosophila melanogaster."
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F., George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N., Sutton G.G., Wortman J.R., Yandell M.D. expand/collapse author list , Zhang Q., Chen L.X., Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L., Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M., Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J., Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C., Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G., Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T., Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.
Science 287:2185-2195(2000) [PubMed: 10731132] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Berkeley.
[2]"Annotation of the Drosophila melanogaster euchromatic genome: a systematic review."
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E., Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P., Bettencourt B.R., Celniker S.E., de Grey A.D.N.J. expand/collapse author list , Drysdale R.A., Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002) [PubMed: 12537572] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley.
[3]Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J., Champe M., Chavez C., Dorsett V., Farfan D., Frise E., George R., Gonzalez M., Guarin H., Li P., Liao G., Miranda A., Mungall C.J., Nunoo J. expand/collapse author list , Pacleb J., Paragas V., Park S., Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M., Celniker S.
Submitted (OCT-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Berkeley EMBL AAL28792.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE014298 Genomic DNA. Translation: AAF48061.1.
AY061244 mRNA. Translation: AAL28792.1.
RefSeqNP_572731.1. NM_132503.2.
UniGeneDm.138.

3D structure databases

HSSPHSSP built from PDB template 1PZW based on UniProtKB Q9U405.
ProteinModelPortalQ9VYX2.
SMRQ9VYX2. Positions 2-79, 294-613.
ModBaseSearch...

Protein-protein interaction databases

IntActQ9VYX2. 3 interactions.
MINTMINT-776693.

Proteomic databases

PRIDEQ9VYX2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaFBtr0073512; FBpp0073361; FBgn0030314.
GeneID32104.
KEGGdme:Dmel_CG11696.
NMPDRfig|7227.3.peg.17446.
UCSCCG11696-RA. d. melanogaster.

Organism-specific databases

FlyBaseFBgn0030314. CG11696.

Phylogenomic databases

eggNOGmeNOG23755.
GeneTreeEMGT00050000001884.
InParanoidQ9VYX2.
OMAVALSSHM.
OrthoDBEOG41JWTQ.
PhylomeDBQ9VYX2.

Gene expression databases

ArrayExpressQ9VYX2.
BgeeQ9VYX2.

Family and domain databases

InterProIPR017956. AT_hook_DNA-bd_motif.
IPR012934. Znf_AD.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
Gene3DG3DSA:3.30.160.60. Znf_C2H2/integrase_DNA-bd. 3 hits.
PfamPF07776. zf-AD. 1 hit.
PF00096. zf-C2H2. 4 hits.
[Graphical view]
SMARTSM00384. AT_hook. 1 hit.
SM00868. zf-AD. 1 hit.
SM00355. ZnF_C2H2. 9 hits.
[Graphical view]
PROSITEPS00028. ZINC_FINGER_C2H2_1. 8 hits.
PS50157. ZINC_FINGER_C2H2_2. 8 hits.
[Graphical view]
ProtoNetSearch...

Other

NextBio776857.

Entry information

Entry nameQ9VYX2_DROME
AccessionPrimary (citable) accession number: Q9VYX2
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: January 25, 2012
This is version 98 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info